CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-slr-2
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA10362
T127026_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA10362
C2H2 ZF
41
63
WQCSICGKLLSSKRSFDEHLNIH
PPA10362
C2H2 ZF
69
92
FTCDHCEYAAASQMTLRRHVLRNH
PPA10362
C2H2 ZF
100
123
YKCPYCGETYMEPASYQQHVSSRH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hba_17251
Heterorhabditis bacteriophora
Hba_17251
N
0.794
ACAC_0000670501
Angiostrongylus cantonensis
ACAC_0000670501
N
0.785
ANCCAN_07259
Ancylostoma caninum
ANCCAN_07259
N
0.785
DICVIV_08337
Dictyocaulus viviparus
DICVIV_08337
N
0.785
NECAME_04758
Necator americanus
NECAME_04758
N
0.779
HCOI01240300
Haemonchus contortus
HCOI01240300
N
0.778
HCOI01560600
Haemonchus contortus
HCOI01560600
N
0.778
EVEC_0001116601
Enterobius vermicularis
EVEC_0001116601
N
0.777
SMUV_0000951601
Syphacia muris
SMUV_0000951601
N
0.777
HPLM_0000022101
Haemonchus placei
HPLM_0000022101
N
0.775
ALUE_0001384201
Ascaris lumbricoides
ALUE_0001384201
N
0.766
TCNE_0000765001
Toxocara canis
TCNE_0000765001
N
0.766