CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PTTG_01100
(
Puccinia triticina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PTTG_01100
T127296_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_01797
M01451_2.00
Puccinia graminis
NGCTGKGN
NCMCAGCN
PBM
Najafabadi et al.(2015a)
pTH10233
0.803
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_01100P0
C2H2 ZF
169
192
KVCGFCQASFTRNERLRYHIESVH
PTTG_01100P0
C2H2 ZF
199
224
YGCDVPGCQRAFRQRSDLLRHQRTVH
Links
Other
C2H2 ZF
family TFs
Other
Puccinia triticina
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGTG_01797
Puccinia graminis
PGTG_01797
D
0.803