CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTTG_08380
(
Puccinia triticina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PTTG_08380
T127313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_07246
M01453_2.00
Puccinia graminis
VCGCCACN
NGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10235
0.827
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_08380P0
C2H2 ZF
231
253
FKCSLCPKSFTRNYDLTRHKSSH
PTTG_08380P0
C2H2 ZF
259
280
HRCSKCGRSFNRRDALIRHTLV
Links
Other
C2H2 ZF
family TFs
Other
Puccinia triticina
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGTG_07246
Puccinia graminis
PGTG_07246
D
0.827