CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000062m.g
(
Setaria italica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Si000062m.g
T128642_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000062m
C2H2 ZF
1222
1245
YACDIEGCSMSFGTKQELSLHKRD
Si000062m
C2H2 ZF
1246
1269
ICPVQGCRRKFFSHKYLLQHRKVH
Si000062m
C2H2 ZF
1275
1299
LKCSWKGCDMAFKWPWARTEHMRVH
Si000062m
C2H2 ZF
1305
1331
YVCPEPECGQTFRFVSDFSRHKRRTGH
Links
Other
C2H2 ZF
family TFs
Other
Setaria italica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J31927
Panicum virgatum
Pavir.J31927
N
0.822
Pavir.Ea03512
Panicum virgatum
Pavir.Ea03512
N
0.764
TCM_014549
Theobroma cacao
TCM_014549
N
0.757