CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_152900
(
Schistosoma mansoni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Smp_152900
T129243_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_152900.1:pep
C2H2 ZF
1084
1106
YQCDICFKRYSGMKSLKNHKLTH
Smp_152900.1:pep
C2H2 ZF
1112
1134
HKCSICGKAFLRADKMRLHEISH
Smp_152900.1:pep
C2H2 ZF
1140
1162
FECATCKQRFTRSDKLKIHHRTH
Smp_152900.1:pep
C2H2 ZF
1168
1190
YACTFCPKRFTRSDKLKIHERIH
Smp_152900.1:pep
C2H2 ZF
1196
1218
YECSHCGKCFARSDKRRLHEKTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mansoni
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SROB_0001523701
Schistosoma rodhaini
SROB_0001523701
N
0.827
A_00063
Schistosoma haematobium
A_00063
N
0.825
SCUD_0000308501
Schistosoma curassoni
SCUD_0000308501
N
0.825
SMRZ_0001945501
Schistosoma margrebowiei
SMRZ_0001945501
N
0.825
SMTD_0002087901
Schistosoma mattheei
SMTD_0002087901
N
0.825
TRE_0000243101
Trichobilharzia regenti
TRE_0000243101
N
0.823
ECPE_0001401001
Echinostoma caproni
ECPE_0001401001
N
0.821
csin101641
Clonorchis sinensis
csin101641
N
0.819
PXEA_0000554601
Protopolystoma xenopodis
PXEA_0000554601
N
0.817
SSLN_0001230301
Schistocephalus solidus
SSLN_0001230301
N
0.777