CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_08787
(
Cicer arietinum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ca_08787
T133697_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_08787
C2H2 ZF
1334
1357
YQCDIEGCTMSFGSKQELVHHKRN
Ca_08787
C2H2 ZF
1358
1381
ICPVKGCGKKFFSHKYLVQHRRVH
Ca_08787
C2H2 ZF
1417
1443
YVCAEPGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Cicer arietinum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA04G36630
Glycine max
GLYMA04G36630
N
0.810
GLYMA06G18300
Glycine max
GLYMA06G18300
N
0.803
GLYMA04G36620
Glycine max
GLYMA04G36620
N
0.797
GLYMA06G18290
Glycine max
GLYMA06G18290
N
0.787
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.773
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.768
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
0.768
30147.m013814
Ricinus communis
30147.m013814
N
0.768
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
0.768
SapurV1A.0486s0080
Salix purpurea
SapurV1A.0486s0080
N
0.768
TCM_014549
Theobroma cacao
TCM_014549
N
0.767
Aquca_011_00361
Aquilegia coerulea
Aquca_011_00361
N
0.767
evm.TU.supercontig_4.49
Carica papaya
evm.TU.supercontig_4.49
N
0.765
cassava3225.m1
Manihot esculenta
cassava3225.m1
N
0.764
Ciclev10018473m.g
Citrus clementina
Ciclev10018473m.g
N
0.757