CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla002614
(
Citrullus lanatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cla002614
T133926_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla002614
C2H2 ZF
593
616
YLCDIEGCNMSFGSKQELAMHKRN
Cla002614
C2H2 ZF
617
640
ICPVKGCGKKFFSHKYLVQHRRVH
Cla002614
C2H2 ZF
646
670
LKCPWKGCKMTFKWAWARTEHIRVH
Cla002614
C2H2 ZF
676
702
YVCAEPGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Citrullus lanatus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_014549
Theobroma cacao
TCM_014549
N
0.770
Ca_07414
Cicer arietinum
Ca_07414
N
0.768
orange1.1g001000m.g
Citrus sinensis
orange1.1g001000m.g
N
0.765