Cla008348 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla008348 T133939_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla008348 C2H2 ZF 27 49

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G06340 Glycine max GLYMA12G06340 N 0.827
MTR_4g064873 Medicago truncatula MTR_4g064873 N 0.827
cassava32634.m1 Manihot esculenta cassava32634.m1 N 0.827
Cucsa.117650 Cucumis sativus Cucsa.117650 N 0.827
BGIOSGA025569 Oryza indica BGIOSGA025569 N 0.817
Bo7g065530 Brassica oleracea Bo7g065530 N 0.817
Bo9g059250 Brassica oleracea Bo9g059250 N 0.817
Bra027500 Brassica rapa Bra027500 N 0.817
Bra033683 Brassica rapa Bra033683 N 0.817
BRADI1G52490 Brachypodium distachyon BRADI1G52490 I 0.817
GLYMA10G32810 Glycine max GLYMA10G32810 N 0.817
GLYMA20G34840 Glycine max GLYMA20G34840 N 0.817
GRMZM2G409452 Zea mays GRMZM2G409452 I 0.817
GRMZM2G443109 Zea mays GRMZM2G443109 I 0.817
GSMUA_Achr8G14360_001 Musa acuminata GSMUA_Achr8G14360_001 N 0.817
LPERR07G09750 Leersia perrieri LPERR07G09750 N 0.817
MTR_1g075430 Medicago truncatula MTR_1g075430 N 0.817
OB07G18110 Oryza brachyantha OB07G18110 N 0.817
OBART07G11660 Oryza barthii OBART07G11660 N 0.817
OGLUM07G11160 Oryza glumaepatula OGLUM07G11160 N 0.817
OLONG_012182 Oryza longistaminata OLONG_012182 N 0.817
ONIVA07G09630 Oryza nivara ONIVA07G09630 N 0.817
ONIVA07G09640 Oryza nivara ONIVA07G09640 N 0.817
OPUNC07G10480 Oryza punctata OPUNC07G10480 N 0.817
ORGLA07G0099100 Oryza glaberrima ORGLA07G0099100 N 0.817
ORUFI07G11810 Oryza rufipogon ORUFI07G11810 N 0.817
OS07G0417400 Oryza sativa OS07G0417400 N 0.817
PRUPE_ppa016491mg Prunus persica PRUPE_ppa016491mg N 0.817
PRUPE_ppa021945mg Prunus persica PRUPE_ppa021945mg N 0.817
Sb02g009930 Sorghum bicolor Sb02g009930 I 0.817
scaffold_800693.1 Arabidopsis lyrata scaffold_800693.1 N 0.817
Si032478m.g Setaria italica Si032478m.g I 0.817
TCM_020819 Theobroma cacao TCM_020819 N 0.817
Traes_2AS_099955797 Triticum aestivum Traes_2AS_099955797 I 0.817
Traes_2BS_0544D9D4B Triticum aestivum Traes_2BS_0544D9D4B I 0.817
Traes_2DS_035AA95E3 Triticum aestivum Traes_2DS_035AA95E3 I 0.817
TRIUR3_25222 Triticum urartu TRIUR3_25222 I 0.817
Cla021877 Citrullus lanatus Cla021877 N 0.817
Pm009419 Prunus mume Pm009419 N 0.817
Bostr.3148s0115 Boechera stricta Bostr.3148s0115 N 0.817
Cagra.19122s0001 Capsella grandiflora Cagra.19122s0001 N 0.817
Carubv10028256m.g Capsella rubella Carubv10028256m.g N 0.817
Ciclev10006751m.g Citrus clementina Ciclev10006751m.g N 0.817
Eucgr.H00184 Eucalyptus grandis Eucgr.H00184 N 0.817
evm.TU.supercontig_44.98 Carica papaya evm.TU.supercontig_44.98 N 0.817
gene30215-v1.0-hybrid Fragaria vesca gene30215-v1.0-hybrid N 0.817
Gorai.011G172000 Gossypium raimondii Gorai.011G172000 N 0.817
Lus10021213.g Linum usitatissimum Lus10021213.g I 0.817
Lus10022204.g Linum usitatissimum Lus10022204.g I 0.817
MDP0000143134 Malus domestica MDP0000143134 N 0.817
orange1.1g037433m.g Citrus sinensis orange1.1g037433m.g N 0.817
Pavir.Ba02387 Panicum virgatum Pavir.Ba02387 I 0.817
Pavir.Bb00955 Panicum virgatum Pavir.Bb00955 I 0.817
SapurV1A.0007s0800 Salix purpurea SapurV1A.0007s0800 I 0.817
SapurV1A.0292s0190 Salix purpurea SapurV1A.0292s0190 I 0.817
AMTR_s00009p00194700 Amborella trichopoda AMTR_s00009p00194700 N 0.814
AMTR_s00012p00258620 Amborella trichopoda AMTR_s00012p00258620 N 0.814
MTR_1g070250 Medicago truncatula MTR_1g070250 N 0.814
VIT_06s0004g05260 Vitis vinifera VIT_06s0004g05260 N 0.814
Cla006093 Citrullus lanatus Cla006093 N 0.814
Cucsa.016990 Cucumis sativus Cucsa.016990 N 0.814
Ciclev10022375m.g Citrus clementina Ciclev10022375m.g N 0.814
orange1.1g044013m.g Citrus sinensis orange1.1g044013m.g N 0.814
PK22236.1 Cannabis sativa PK22236.1 N 0.814
PDK_20s1360411g002 Phoenix dactylifera PDK_20s1360411g002 N 0.814
F775_00917 Aegilops tauschii F775_00917 I 0.798
GSMUA_Achr11G02150_001 Musa acuminata GSMUA_Achr11G02150_001 N 0.798
GLYMA07G16290 Glycine max GLYMA07G16290 I 0.769
MTR_7g063220 Medicago truncatula MTR_7g063220 I 0.769
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.769
PRUPE_ppb012667mg Prunus persica PRUPE_ppb012667mg N 0.769
Pm002649 Prunus mume Pm002649 N 0.769
mgf024356m Mimulus guttatus mgf024356m I 0.769
chr1.CM0147.870.nc Lotus japonicus chr1.CM0147.870.nc I 0.769
TCM_021876 Theobroma cacao TCM_021876 N 0.767
28345.m000111 Ricinus communis 28345.m000111 N 0.767
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.767
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N 0.767
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.767
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.757
Bo1g017920 Brassica oleracea Bo1g017920 I 0.757
Bra013257 Brassica rapa Bra013257 I 0.757
GLYMA11G34285 Glycine max GLYMA11G34285 I 0.757
Cla021878 Citrullus lanatus Cla021878 I 0.757
cassava22028.m1 Manihot esculenta cassava22028.m1 I 0.757
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.757
e_gw1.14.264.1 Physcomitrella patens e_gw1.14.264.1 I 0.757
e_gw1.186.49.1 Physcomitrella patens e_gw1.186.49.1 I 0.757
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.757
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.757
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.757