Cmyd_10010411 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10010411 T134346_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10010411 C2H2 ZF 437 459
Cmyd_10010411 C2H2 ZF 465 487
Cmyd_10010411 C2H2 ZF 704 725
Cmyd_10010411 C2H2 ZF 731 753
Cmyd_10010411 C2H2 ZF 763 785
Cmyd_10010411 C2H2 ZF 1009 1031
Cmyd_10010411 C2H2 ZF 1037 1059
Cmyd_10010411 C2H2 ZF 1145 1167
Cmyd_10010411 C2H2 ZF 1173 1195

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XP_002936493 Xenopus tropicalis XP_002936493 N 0.826
XP_002936494 Xenopus tropicalis XP_002936494 N 0.826
XP_002936495 Xenopus tropicalis XP_002936495 N 0.826
Afo_R009325 Aptenodytes forsteri Afo_R009325 N 0.822
Alligator_sinensis_CCG003694.1 Alligator sinensis Alligator_sinensis_CCG003694.1 N 0.822
Brh_R007854 Buceros rhinoceros Brh_R007854 N 0.822
Gfo_R000617 Geospiza fortis Gfo_R000617 N 0.822
Ogr15828 Ophisaurus gracilis Ogr15828 N 0.822
Tal_R008175 Tyto alba Tal_R008175 N 0.822
Sall3 Rattus norvegicus ENSRNOG00000026116 N 0.819
SALL3 Callithrix jacchus ENSCJAG00000007332 N 0.817
ENSCSAG00000018244 Chlorocebus sabaeus ENSCSAG00000018244 N 0.817
SALL3 Homo sapiens ENSG00000256463 N 0.817
SALL3 Gorilla gorilla ENSGGOG00000008127 N 0.817
SALL3 Macaca mulatta ENSMMUG00000000286 N 0.817
SALL3 Otolemur garnettii ENSOGAG00000031681 N 0.817
SALL3 Loxodonta africana ENSLAFG00000013521 N 0.815
SALL3 Dasypus novemcinctus ENSDNOG00000025483 N 0.814
SALL3 Procavia capensis ENSPCAG00000006522 N 0.812
SALL3 Myotis lucifugus ENSMLUG00000010582 N 0.807
Myotis_brandtii_Sall3_10034211 Myotis brandtii Myotis_brandtii_Sall3_10034211 N 0.807
ENSP00000299466-D1 Bos grunniens ENSP00000299466-D1 N 0.805
SALL3 Sus scrofa ENSSSCG00000004858 N 0.804
ENSOARG00000004353 Ovis aries ENSOARG00000004353 N 0.793
Sall3 Dipodomys ordii ENSDORG00000002702 N 0.785
ENSNLEG00000008217 Nomascus leucogenys ENSNLEG00000008217 N 0.785
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N 0.778
SALL1 Otolemur garnettii ENSOGAG00000027316 N 0.773
Sall1 Rattus norvegicus ENSRNOG00000013907 N 0.773
sall1 Xenopus tropicalis XB-GENE-491393 N 0.773
sall1.L Xenopus laevis XB-GENE-866060 N 0.772
ENSONIG00000002831 Oreochromis niloticus ENSONIG00000002831 N 0.770
sall1a Tetraodon nigroviridis ENSTNIG00000004257 N 0.770
sall1a Takifugu rubripes ENSTRUG00000008950 N 0.770
ENSLOCG00000007283 Lepisosteus oculatus ENSLOCG00000007283 N 0.765
sall1a Gasterosteus aculeatus ENSGACG00000016702 N 0.764
sall1a Oryzias latipes ENSORLG00000013827 N 0.764
ENSPFOG00000015799 Poecilia formosa ENSPFOG00000015799 N 0.764
ENSXMAG00000016273 Xiphophorus maculatus ENSXMAG00000016273 N 0.764