Gfo_R007918 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R007918 T135762_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB6
M08364_2.00 		Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS		 ChIP-seq
Schmitges et al.(2016)
Q15916.MEME 		0.807 0.967
ZBTB6
M08940_2.00 		Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN		 Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C 		0.807 0.967
ZBTB6
M10307_2.00 		Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV		 Transfac
Matys et al.(2006)
V$ZID_01 		0.807 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R007918 C2H2 ZF 308 330
Gfo_R007918 C2H2 ZF 333 355
Gfo_R007918 C2H2 ZF 361 383
Gfo_R007918 C2H2 ZF 389 412

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000002014 Ficedula albicollis ENSFALG00000002014 I 0.827
ZBTB6 Gallus gallus ENSGALG00000021570 I 0.827
ZBTB6 Meleagris gallopavo ENSMGAG00000008047 I 0.827
ENSPSIG00000001016 Pelodiscus sinensis ENSPSIG00000001016 I 0.827
ZBTB6 Taeniopygia guttata ENSTGUG00000006932 I 0.827
Afo_R013762 Aptenodytes forsteri Afo_R013762 I 0.827
Alligator_sinensis_CCG016192.1 Alligator sinensis Alligator_sinensis_CCG016192.1 I 0.827
Brh_R009093 Buceros rhinoceros Brh_R009093 I 0.827
Cmyd_10017123 Chelonia mydas Cmyd_10017123 I 0.827
Ogr13906 Ophisaurus gracilis Ogr13906 I 0.827
Pvit_08507 Pogona vitticeps Pvit_08507 I 0.827
Tal_R000026 Tyto alba Tal_R000026 I 0.827
ZBTB6 Monodelphis domestica ENSMODG00000023551 I 0.825
ENSSHAG00000008092 Sarcophilus harrisii ENSSHAG00000008092 I 0.825
ZBTB6 Bos taurus ENSBTAG00000039815 I 0.807
ZBTB6 Canis familiaris ENSCAFG00000032570 I 0.807
ZBTB6 Choloepus hoffmanni ENSCHOG00000013771 I 0.807
ZBTB6 Callithrix jacchus ENSCJAG00000020049 I 0.807
ENSCPOG00000010372 Cavia porcellus ENSCPOG00000010372 I 0.807
ENSCSAG00000019713 Chlorocebus sabaeus ENSCSAG00000019713 I 0.807
ZBTB6 Dasypus novemcinctus ENSDNOG00000014591 I 0.807
ZBTB6 Equus caballus ENSECAG00000002222 I 0.807
ZBTB6 Erinaceus europaeus ENSEEUG00000013087 I 0.807
ZBTB6 Echinops telfairi ENSETEG00000009867 I 0.807
ZBTB6 Homo sapiens ENSG00000186130 D 0.807
ZBTB6 Gorilla gorilla ENSGGOG00000014555 I 0.807
ZBTB6 Loxodonta africana ENSLAFG00000014046 I 0.807
ENSMICG00000003244 Microcebus murinus ENSMICG00000003244 I 0.807
ZBTB6 Macaca mulatta ENSMMUG00000000496 I 0.807
Zbtb6 Mus musculus ENSMUSG00000066798 I 0.807
ENSNLEG00000017214 Nomascus leucogenys ENSNLEG00000017214 I 0.807
ENSOARG00000019166 Ovis aries ENSOARG00000019166 I 0.807
ZBTB26 Oryctolagus cuniculus ENSOCUG00000008815 I 0.807
ZBTB6 Otolemur garnettii ENSOGAG00000010682 I 0.807
ENSPANG00000016323 Papio anubis ENSPANG00000016323 I 0.807
ENSPPYG00000019584 Pongo abelii ENSPPYG00000019584 I 0.807
ZBTB6 Pan troglodytes ENSPTRG00000021340 I 0.807
ZBTB6 Pteropus vampyrus ENSPVAG00000017594 I 0.807
Zbtb6 Rattus norvegicus ENSRNOG00000009340 I 0.807
ZBTB6 Sorex araneus ENSSARG00000012333 I 0.807
ENSSTOG00000010670 Ictidomys tridecemlineatus ENSSTOG00000010670 I 0.807
ZBTB6 Tursiops truncatus ENSTTRG00000016956 I 0.807
ZBTB6 Vicugna pacos ENSVPAG00000005997 I 0.807
ENSP00000362763-D1 Bos grunniens ENSP00000362763-D1 I 0.807
ENSP00000362763 Macaca fascicularis ENSP00000362763 I 0.807
zbtb6 Xenopus tropicalis XB-GENE-5823898 I 0.807
ZBTB6 Myotis lucifugus ENSMLUG00000014003 I 0.804
Myotis_brandtii_ZBTB6_10028432 Myotis brandtii Myotis_brandtii_ZBTB6_10028432 I 0.804
ZBTB6 Sus scrofa ENSSSCG00000005576 I 0.802