Gfo_R008521 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R008521 T135770_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R008521 C2H2 ZF 388 410
Gfo_R008521 C2H2 ZF 419 441
Gfo_R008521 C2H2 ZF 481 504
Gfo_R008521 C2H2 ZF 510 532
Gfo_R008521 C2H2 ZF 538 561
Gfo_R008521 C2H2 ZF 567 588
Gfo_R008521 C2H2 ZF 595 618
Gfo_R008521 C2H2 ZF 624 646
Gfo_R008521 C2H2 ZF 652 675
Gfo_R008521 C2H2 ZF 681 703
Gfo_R008521 C2H2 ZF 709 732
Gfo_R008521 C2H2 ZF 738 761

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF711 Taeniopygia guttata ENSTGUG00000002466 N 0.827
ENSFALG00000004005 Ficedula albicollis ENSFALG00000004005 N 0.826
ENSPSIG00000003246 Pelodiscus sinensis ENSPSIG00000003246 N 0.826
Aan_R004750 Calypte anna Aan_R004750 N 0.826
Afo_R014155 Aptenodytes forsteri Afo_R014155 N 0.826
Brh_R000426 Buceros rhinoceros Brh_R000426 N 0.826
Tal_R004476 Tyto alba Tal_R004476 N 0.826
Ogr04055 Ophisaurus gracilis Ogr04055 N 0.807
ENSAPLG00000007311 Anas platyrhynchos ENSAPLG00000007311 N 0.804
Alligator_sinensis_CCG016799.1 Alligator sinensis Alligator_sinensis_CCG016799.1 N 0.795
Pvit_08921 Pogona vitticeps Pvit_08921 N 0.794
ZNF711 Anolis carolinensis ENSACAG00000014034 N 0.788
ZNF711 Monodelphis domestica ENSMODG00000014346 N 0.780