Ogr12593 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr12593 T136674_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP2
M04525_2.00 		Homo sapiens
NYWAGYCCCGCCCMCYH
DRGKGGGCGGGRCTWRN		 SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX 		0.807 0.957
SP2
M08326_2.00 		Homo sapiens
YCCCGCCCM
KGGGCGGGR		 ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE 		0.807 0.957
SP2
M08092_2.00 		Homo sapiens
BYCCCGCCYCYBNNB
VNNVRGRGGCGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0516.1 		0.807 0.957
SP2
M07932_2.00 		Homo sapiens
KSCTAGAGMGGCBVB
VBVGCCKCTCTAGSM		 ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha 		0.807 0.957
SP2
M08911_2.00 		Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A 		0.807 0.957
Sp2
M08970_2.00 		Mus musculus
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B 		0.807 0.957
SP2
M10250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_01 		0.807 0.957
SP2
M10251_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_04 		0.807 0.957
SP2
M10252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_06 		0.807 0.957
SP2
M10253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3_01 		0.807 0.957
SP2
M10254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3 		0.807 0.957
SP2
M04526_2.00 		Homo sapiens
NTWAGYCCCGCCCMCTT
AAGKGGGCGGGRCTWAN		 SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX 		0.807 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr12593 C2H2 ZF 566 590
Ogr12593 C2H2 ZF 596 620
Ogr12593 C2H2 ZF 626 648

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SP2 Gallus gallus ENSGALG00000000233 I 0.827
Aan_R002402 Calypte anna Aan_R002402 I 0.827
Alligator_sinensis_CCG014457.1 Alligator sinensis Alligator_sinensis_CCG014457.1 I 0.827
Pvit_13958 Pogona vitticeps Pvit_13958 I 0.827
SP2 Anolis carolinensis ENSACAG00000006793 I 0.823
ENSLACG00000006434 Latimeria chalumnae ENSLACG00000006434 I 0.823
ENSLOCG00000013729 Lepisosteus oculatus ENSLOCG00000013729 I 0.823
sp2 Gasterosteus aculeatus ENSGACG00000019811 I 0.820
ENSGMOG00000007030 Gadus morhua ENSGMOG00000007030 I 0.820
ENSONIG00000000117 Oreochromis niloticus ENSONIG00000000117 I 0.820
ENSPFOG00000013068 Poecilia formosa ENSPFOG00000013068 I 0.820
ENSXMAG00000014321 Xiphophorus maculatus ENSXMAG00000014321 I 0.820
sp2 Danio rerio ENSDARG00000076763 I 0.816
sp2 Oryzias latipes ENSORLG00000000102 I 0.816
sp2 Tetraodon nigroviridis ENSTNIG00000006290 I 0.816
sp2 Takifugu rubripes ENSTRUG00000007642 I 0.816
ENSAMXG00000018374 Astyanax mexicanus ENSAMXG00000018374 I 0.812
ENSAMEG00000004772 Ailuropoda melanoleuca ENSAMEG00000004772 I 0.807
SP2 Bos taurus ENSBTAG00000013740 I 0.807
SP2 Canis familiaris ENSCAFG00000016812 I 0.807
ENSCHOG00000008313 Choloepus hoffmanni ENSCHOG00000008313 I 0.807
SP2 Callithrix jacchus ENSCJAG00000007713 I 0.807
SP2 Cavia porcellus ENSCPOG00000014943 I 0.807
ENSCSAG00000002567 Chlorocebus sabaeus ENSCSAG00000002567 I 0.807
SP2 Equus caballus ENSECAG00000012859 I 0.807
SP2 Erinaceus europaeus ENSEEUG00000014248 I 0.807
SP2 Echinops telfairi ENSETEG00000009168 I 0.807
SP2 Felis catus ENSFCAG00000009365 I 0.807
SP2 Homo sapiens ENSG00000167182 D 0.807
SP2 Gorilla gorilla ENSGGOG00000005330 I 0.807
SP2 Loxodonta africana ENSLAFG00000021817 I 0.807
ENSMICG00000014053 Microcebus murinus ENSMICG00000014053 I 0.807
SP2 Myotis lucifugus ENSMLUG00000005000 I 0.807
SP2 Macaca mulatta ENSMMUG00000004765 I 0.807
ENSMPUG00000015289 Mustela putorius furo ENSMPUG00000015289 I 0.807
Sp2 Mus musculus ENSMUSG00000018678 D 0.807
ENSNLEG00000002058 Nomascus leucogenys ENSNLEG00000002058 I 0.807
ENSOARG00000007752 Ovis aries ENSOARG00000007752 I 0.807
SP2 Oryctolagus cuniculus ENSOCUG00000027415 I 0.807
SP2 Otolemur garnettii ENSOGAG00000030380 I 0.807
ENSPANG00000022922 Papio anubis ENSPANG00000022922 I 0.807
SP2 Procavia capensis ENSPCAG00000002140 I 0.807
ENSPPYG00000008885 Pongo abelii ENSPPYG00000008885 I 0.807
SP2 Pan troglodytes ENSPTRG00000009342 I 0.807
SP2 Pteropus vampyrus ENSPVAG00000004255 I 0.807
Sp2 Rattus norvegicus ENSRNOG00000010492 I 0.807
SP2 Sorex araneus ENSSARG00000003559 I 0.807
ENSSTOG00000015926 Ictidomys tridecemlineatus ENSSTOG00000015926 I 0.807
ENSP00000365931 Macaca fascicularis ENSP00000365931 I 0.807
Myotis_brandtii_SP2_10030436 Myotis brandtii Myotis_brandtii_SP2_10030436 I 0.807
ENSSHAG00000005633 Sarcophilus harrisii ENSSHAG00000005633 I 0.803
SP2 Tursiops truncatus ENSTTRG00000012483 I 0.794
sp2 Xenopus tropicalis XB-GENE-968274 I 0.794
sp2.S Xenopus laevis XB-GENE-968279 I 0.794
SP2 Monodelphis domestica ENSMODG00000012452 I 0.777