cassava18962.valid.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava18962.valid.m1 T137830_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18962.valid.m1 C2H2 ZF 76 99

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf002951m Mimulus guttatus mgf002951m N 0.827
BGIOSGA031305 Oryza indica BGIOSGA031305 N 0.817
OBART09G20240 Oryza barthii OBART09G20240 N 0.817
OGLUM09G20980 Oryza glumaepatula OGLUM09G20980 N 0.817
OLONG_005584 Oryza longistaminata OLONG_005584 N 0.817
OMERI01G25790 Oryza meridionalis OMERI01G25790 N 0.817
ONIVA03G00390 Oryza nivara ONIVA03G00390 N 0.817
OPUNC09G18580 Oryza punctata OPUNC09G18580 N 0.817
ORGLA09G0165100 Oryza glaberrima ORGLA09G0165100 N 0.817
ORUFI09G21860 Oryza rufipogon ORUFI09G21860 N 0.817
OS09G0570200 Oryza sativa OS09G0570200 N 0.817
PRUPE_ppa002336mg Prunus persica PRUPE_ppa002336mg N 0.817
Pm019310 Prunus mume Pm019310 N 0.817
30169.m006244 Ricinus communis 30169.m006244 N 0.817
MDP0000291317 Malus domestica MDP0000291317 N 0.817
MDP0000157870 Malus domestica MDP0000157870 N 0.776
MDP0000905888 Malus domestica MDP0000905888 N 0.776
GSMUA_Achr1G03120_001 Musa acuminata GSMUA_Achr1G03120_001 N 0.768
Aquca_013_00290 Aquilegia coerulea Aquca_013_00290 N 0.768
VIT_16s0050g00700 Vitis vinifera VIT_16s0050g00700 N 0.766
AC234522.1_FG009 Zea mays AC234522.1_FG009 N 0.758
GLYMA10G37780 Glycine max GLYMA10G37780 N 0.758
GRMZM2G142502 Zea mays GRMZM2G142502 N 0.758
TCM_015200 Theobroma cacao TCM_015200 N 0.758
evm.TU.supercontig_107.76 Carica papaya evm.TU.supercontig_107.76 N 0.758
gene13234-v1.0-hybrid Fragaria vesca gene13234-v1.0-hybrid N 0.758
Gorai.004G117900 Gossypium raimondii Gorai.004G117900 N 0.758
Gorai.008G275600 Gossypium raimondii Gorai.008G275600 N 0.758
PK09701.1 Cannabis sativa PK09701.1 N 0.758