Ocbimv22038914m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22038914m.g T142113_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF76
M04398_2.00 		Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX 		0.775 0.839
ZNF76
M08278_2.00 		Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV		 ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE 		0.775 0.839
ZNF76
M08856_2.00 		Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT		 Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C 		0.775 0.839
ZNF76
M04399_2.00 		Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX 		0.775 0.839
Zfp143
M09010_2.00 		Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A 		0.772 0.851
ZNF143
M02899_2.00 		Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR		 SELEX
Jolma et al.(2013)
ZNF143_1 		0.772 0.845
ZNF143
M07931_2.00 		Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford 		0.772 0.845
ZNF143
M08910_2.00 		Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A 		0.772 0.845
ZNF143
M09510_2.00 		Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN		 Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600 		0.772 0.845
ZNF143
M10247_2.00 		Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN		 Transfac
Matys et al.(2006)
V$STAF_01 		0.772 0.845
ZNF143
M10248_2.00 		Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK		 Transfac
Matys et al.(2006)
V$STAF_02 		0.772 0.845
ZNF143
M10249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAF_Q4_01 		0.772 0.845
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22038914m.p C2H2 ZF 125 149
Ocbimv22038914m.p C2H2 ZF 155 179
Ocbimv22038914m.p C2H2 ZF 185 209
Ocbimv22038914m.p C2H2 ZF 215 239
Ocbimv22038914m.p C2H2 ZF 245 269
Ocbimv22038914m.p C2H2 ZF 275 299
Ocbimv22038914m.p C2H2 ZF 305 328
Ocbimv22038915m.p C2H2 ZF 106 130
Ocbimv22038915m.p C2H2 ZF 136 160
Ocbimv22038915m.p C2H2 ZF 166 190
Ocbimv22038915m.p C2H2 ZF 196 220
Ocbimv22038915m.p C2H2 ZF 226 250
Ocbimv22038915m.p C2H2 ZF 256 280
Ocbimv22038915m.p C2H2 ZF 286 309

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAR015659 Strigamia maritima SMAR015659 I 0.802
Sakowv30036637m.g Saccoglossus kowalevskii Sakowv30036637m.g I 0.794
Sakowv30044960m.g Saccoglossus kowalevskii Sakowv30044960m.g I 0.794
LotgiG222832 Lottia gigantea LotgiG222832 I 0.791
ENSLOCG00000011655 Lepisosteus oculatus ENSLOCG00000011655 I 0.783
Gfo_R002960 Geospiza fortis Gfo_R002960 I 0.777
znf76 Danio rerio ENSDARG00000013279 I 0.776
ENSAMEG00000000752 Ailuropoda melanoleuca ENSAMEG00000000752 I 0.775
ZNF76 Bos taurus ENSBTAG00000006170 I 0.775
ZNF76 Canis familiaris ENSCAFG00000001304 I 0.775
ZNF76 Choloepus hoffmanni ENSCHOG00000003197 I 0.775
ZNF76 Callithrix jacchus ENSCJAG00000015519 I 0.775
ZNF76 Cavia porcellus ENSCPOG00000007381 I 0.775
ENSCSAG00000009955 Chlorocebus sabaeus ENSCSAG00000009955 I 0.775
ZNF76 Dasypus novemcinctus ENSDNOG00000015856 I 0.775
ZNF76 Equus caballus ENSECAG00000014843 I 0.775
ZNF76 Felis catus ENSFCAG00000005893 I 0.775
ZNF76 Homo sapiens ENSG00000065029 D 0.775
ZNF76 Gorilla gorilla ENSGGOG00000014188 I 0.775
ZNF76 Loxodonta africana ENSLAFG00000026071 I 0.775
ZNF76 Myotis lucifugus ENSMLUG00000008610 I 0.775
ZNF76 Macaca mulatta ENSMMUG00000023559 I 0.775
ZNF76 Monodelphis domestica ENSMODG00000013806 I 0.775
ENSMPUG00000003522 Mustela putorius furo ENSMPUG00000003522 I 0.775
Zfp523 Mus musculus ENSMUSG00000024220 I 0.775
ZNF76 Oryctolagus cuniculus ENSOCUG00000015630 I 0.775
ENSOPRG00000009136 Ochotona princeps ENSOPRG00000009136 I 0.775
ENSPANG00000021154 Papio anubis ENSPANG00000021154 I 0.775
ENSPPYG00000016525 Pongo abelii ENSPPYG00000016525 I 0.775
ZNF76 Pan troglodytes ENSPTRG00000018080 I 0.775
ZNF76 Pteropus vampyrus ENSPVAG00000008041 I 0.775
Zfp523 Rattus norvegicus ENSRNOG00000000501 I 0.775
ENSSHAG00000009934 Sarcophilus harrisii ENSSHAG00000009934 I 0.775
ZNF76 Sus scrofa ENSSSCG00000001537 I 0.775
ENSSTOG00000000256 Ictidomys tridecemlineatus ENSSTOG00000000256 I 0.775
ZNF76 Tursiops truncatus ENSTTRG00000009380 I 0.775
ENSBTAP00000008112-D1 Bos grunniens ENSBTAP00000008112-D1 I 0.775
ENSP00000363064 Macaca fascicularis ENSP00000363064 I 0.775
Myotis_brandtii_ZNF76_10017771 Myotis brandtii Myotis_brandtii_ZNF76_10017771 I 0.775
ZNF76 Otolemur garnettii ENSOGAG00000002935 I 0.774
ZNF143 Anolis carolinensis ENSACAG00000009338 I 0.772
ENSAMEG00000003872 Ailuropoda melanoleuca ENSAMEG00000003872 I 0.772
ENSAPLG00000002385 Anas platyrhynchos ENSAPLG00000002385 I 0.772
ZNF143 Canis familiaris ENSCAFG00000007373 I 0.772
ZNF143 Callithrix jacchus ENSCJAG00000011327 I 0.772
ZNF143 Cavia porcellus ENSCPOG00000003109 I 0.772
ZNF143 Equus caballus ENSECAG00000018889 I 0.772
ZNF143 Erinaceus europaeus ENSEEUG00000000955 I 0.772
ENSFALG00000000985 Ficedula albicollis ENSFALG00000000985 I 0.772
ZNF143 Felis catus ENSFCAG00000002342 I 0.772
ZNF143 Homo sapiens ENSG00000166478 D 0.772
ZNF143 Gallus gallus ENSGALG00000005787 I 0.772
ZNF143 Loxodonta africana ENSLAFG00000004487 I 0.772
ENSLOCG00000003619 Lepisosteus oculatus ENSLOCG00000003619 I 0.772
ENSMEUG00000003014 Macropus eugenii ENSMEUG00000003014 I 0.772
ZNF143 Meleagris gallopavo ENSMGAG00000006206 I 0.772
ZNF143 Microcebus murinus ENSMICG00000004353 I 0.772
ZNF143 Macaca mulatta ENSMMUG00000008758 I 0.772
ZNF143 Monodelphis domestica ENSMODG00000007909 I 0.772
ENSMPUG00000012796 Mustela putorius furo ENSMPUG00000012796 I 0.772
Zfp143 Mus musculus ENSMUSG00000061079 D 0.772
ZNF143 Oryctolagus cuniculus ENSOCUG00000005226 I 0.772
ZNF143 Otolemur garnettii ENSOGAG00000011518 I 0.772
ZNF143 Ochotona princeps ENSOPRG00000005466 I 0.772
ENSPANG00000002501 Papio anubis ENSPANG00000002501 I 0.772
ENSPPYG00000003495 Pongo abelii ENSPPYG00000003495 I 0.772
ENSPSIG00000009683 Pelodiscus sinensis ENSPSIG00000009683 I 0.772
ZNF143 Pan troglodytes ENSPTRG00000003349 I 0.772
Zfp143 Rattus norvegicus ENSRNOG00000010087 I 0.772
ZNF143 Sorex araneus ENSSARG00000007780 I 0.772
ENSTGUG00000008153 Taeniopygia guttata ENSTGUG00000008153 I 0.772
ENSTSYG00000004324 Tarsius syrichta ENSTSYG00000004324 I 0.772
Aan_R006576 Calypte anna Aan_R006576 I 0.772
Afo_R014591 Aptenodytes forsteri Afo_R014591 I 0.772
Alligator_sinensis_CCG018668.1 Alligator sinensis Alligator_sinensis_CCG018668.1 I 0.772
Brh_R005520 Buceros rhinoceros Brh_R005520 I 0.772
ENSP00000379847 Macaca fascicularis ENSP00000379847 I 0.772
Gfo_R011843 Geospiza fortis Gfo_R011843 I 0.772
Pvit_03784 Pogona vitticeps Pvit_03784 I 0.772
Tal_R001092 Tyto alba Tal_R001092 I 0.772
AAH73068 Xenopus laevis AAH73068 I 0.772
znf143 Xenopus tropicalis XB-GENE-1012504 I 0.772
znf143b Danio rerio ENSDARG00000041581 I 0.771
ENSGMOG00000001888 Gadus morhua ENSGMOG00000001888 I 0.771
ZNF143 Myotis lucifugus ENSMLUG00000000213 I 0.771
ENSOARG00000012477 Ovis aries ENSOARG00000012477 I 0.771
ENSPFOG00000008911 Poecilia formosa ENSPFOG00000008911 I 0.771
znf143b Tetraodon nigroviridis ENSTNIG00000013739 I 0.771
znf143 Takifugu rubripes ENSTRUG00000009324 I 0.771
ZNF143 Tursiops truncatus ENSTTRG00000015353 I 0.771
ENSXMAG00000005152 Xiphophorus maculatus ENSXMAG00000005152 I 0.771
ENSP00000379847-D1 Bos grunniens ENSP00000379847-D1 I 0.771
znf143.S Xenopus laevis XB-GENE-1012509 I 0.771
ENSFALG00000003698 Ficedula albicollis ENSFALG00000003698 I 0.770
ENSPSIG00000005652 Pelodiscus sinensis ENSPSIG00000005652 I 0.770
ZNF76 Taeniopygia guttata ENSTGUG00000001745 I 0.770
Afo_R002092 Aptenodytes forsteri Afo_R002092 I 0.770
Alligator_sinensis_CCG020455.1 Alligator sinensis Alligator_sinensis_CCG020455.1 I 0.770
Cmyd_10011173 Chelonia mydas Cmyd_10011173 I 0.770
ENSAMXG00000003833 Astyanax mexicanus ENSAMXG00000003833 I 0.769
ENSAMXG00000008869 Astyanax mexicanus ENSAMXG00000008869 I 0.769
znf143b Gasterosteus aculeatus ENSGACG00000009776 I 0.769
ENSLACG00000017669 Latimeria chalumnae ENSLACG00000017669 I 0.769
ZNF143 Ornithorhynchus anatinus ENSOANG00000005853 I 0.769
ENSONIG00000015524 Oreochromis niloticus ENSONIG00000015524 I 0.769
Ogr18895 Ophisaurus gracilis Ogr18895 I 0.769
Tal_R002540 Tyto alba Tal_R002540 I 0.769
estExt_fgenesh2_pg.C_1970081 Branchiostoma floridae estExt_fgenesh2_pg.C_1970081 I 0.769
Myotis_brandtii_ZNF143_10021171 Myotis brandtii Myotis_brandtii_ZNF143_10021171 I 0.768
ENSCSAG00000004520 Chlorocebus sabaeus ENSCSAG00000004520 I 0.767
ENSSTOG00000009647 Ictidomys tridecemlineatus ENSSTOG00000009647 I 0.765
znf143b Oryzias latipes ENSORLG00000001130 I 0.764
BGLB001048 Biomphalaria glabrata BGLB001048 I 0.761