Sakowv30008117m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30008117m.g T142226_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.797 0.877
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.797 0.877
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.797 0.877
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.797 0.877
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23959626_peptide C2H2 ZF 72 93
23959626_peptide C2H2 ZF 99 121
23959626_peptide C2H2 ZF 127 149
23959626_peptide C2H2 ZF 155 177
23959626_peptide C2H2 ZF 183 205

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG4919 Capitella teleta CapteG4919 I 0.801
Ocbimv22030200m.g Octopus bimaculoides Ocbimv22030200m.g I 0.799
AGAP004331 Anopheles gambiae AGAP004331 I 0.797
gl Drosophila melanogaster FBgn0004618 D 0.797
gl Drosophila virilis FBgn0015211 I 0.797
GA20515 Drosophila pseudoobscura FBgn0080509 I 0.797
GF18117 Drosophila ananassae FBgn0095135 I 0.797
GG16477 Drosophila erecta FBgn0108708 I 0.797
GH19229 Drosophila grimshawi FBgn0126695 I 0.797
GI24263 Drosophila mojavensis FBgn0146986 I 0.797
GL23194 Drosophila persimilis FBgn0160784 I 0.797
GM18708 Drosophila sechellia FBgn0173613 I 0.797
GD20175 Drosophila simulans FBgn0191653 I 0.797
GK11495 Drosophila willistoni FBgn0213506 I 0.797
GE25205 Drosophila yakuba FBgn0242289 I 0.797
PHUM530160 Pediculus humanus PHUM530160 I 0.797
CLEC000700 Cimex lectularius CLEC000700 I 0.797
LCUP002895 Lucilia cuprina LCUP002895 I 0.797
AATE012213 Anopheles atroparvus AATE012213 I 0.797
ACUA005738 Anopheles culicifacies ACUA005738 I 0.797
AFAF008430 Anopheles farauti AFAF008430 I 0.797
AFUN002458 Anopheles funestus AFUN002458 I 0.797
AMAM014008 Anopheles maculatus AMAM014008 I 0.797
MDOA012721 Musca domestica MDOA012721 I 0.797
HMEL016965 Heliconius melpomene HMEL016965 I 0.795
KGM_06609 Danaus plexippus KGM_06609 I 0.795
ADAC004790 Anopheles darlingi ADAC004790 I 0.793
tetur07g01570 Tetranychus urticae tetur07g01570 I 0.793
ACEP21757 Atta cephalotes ACEP21757 I 0.792
GB43258 Apis mellifera GB43258 I 0.792
NV10631 Nasonia vitripennis NV10631 I 0.792
CpipJ_CPIJ006366 Culex pipiens CpipJ_CPIJ006366 I 0.791
CPIJ006366 Culex quinquefasciatus CPIJ006366 I 0.791
MCINX014711 Melitaea cinxia MCINX014711 I 0.791
CGI_10011936 Crassostrea gigas CGI_10011936 I 0.790
SMAR000758 Strigamia maritima SMAR000758 I 0.789
ACYPI008619 Acyrthosiphon pisum ACYPI008619 I 0.787
ISCW013678 Ixodes scapularis ISCW013678 I 0.787
BGLB012448 Biomphalaria glabrata BGLB012448 I 0.787
YQE_07567 Dendroctonus ponderosae YQE_07567 I 0.778
LotgiG155751 Lottia gigantea LotgiG155751 I 0.775
TC012565 Tribolium castaneum TC012565 I 0.775
HelroG86767 Helobdella robusta HelroG86767 I 0.773
PXEA_0003135501 Protopolystoma xenopodis PXEA_0003135501 I 0.762
ML19062a Mnemiopsis leidyi ML19062a I 0.761