CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30032823m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30032823m.g
T142418_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF10
M04489_2.00
Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX
0.780
0.841
KLF10
M08246_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF10
0.780
0.841
KLF10
M08317_2.00
Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS
ChIP-seq
Schmitges et al.(2016)
Q13118.MEME
0.780
0.841
KLF10
M10228_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TIEG1_Q6
0.780
0.841
KLF10
M04490_2.00
Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX
0.780
0.841
KLF11
M00242_2.00
Homo sapiens
MCGCCCCC
GGGGGCGK
PBM
Barrera et al.(2016)
KLF11_REF
0.776
0.797
KLF11
M04554_2.00
Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX
0.776
0.797
KLF11
M10261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKLF_Q5
0.776
0.797
KLF11
M00241_2.00
Homo sapiens
MCGCCCMC
GKGGGCGK
PBM
Barrera et al.(2016)
KLF11_R402Q
0.776
0.797
KLF11
M04555_2.00
Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX
0.776
0.797
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23943103_peptide
C2H2 ZF
417
441
HICTYTNCGKTYFKSSHLKAHMRTH
23943103_peptide
C2H2 ZF
447
471
FKCTWNECEKTFARSDELSRHKRTH
23943103_peptide
C2H2 ZF
477
499
FVCPMCERRFMRSDHLTKHARRH
23943104_peptide
C2H2 ZF
417
441
HICTYTNCGKTYFKSSHLKAHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
226 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R003929
Calypte anna
Aan_R003929
I
0.764
Aan_R015392
Calypte anna
Aan_R015392
I
0.760
AARA009355
Anopheles arabiensis
AARA009355
N
0.757
ACEP15823
Atta cephalotes
ACEP15823
N
0.786
ACEP19659
Atta cephalotes
ACEP19659
N
0.757
ACOM031370
Anopheles coluzzii
ACOM031370
N
0.757
AEPI003098
Anopheles epiroticus
AEPI003098
N
0.757
AEPI009274
Anopheles epiroticus
AEPI009274
N
0.757
Afo_R002224
Aptenodytes forsteri
Afo_R002224
I
0.780
Afo_R015752
Aptenodytes forsteri
Afo_R015752
I
0.760
Alligator_sinensis_CCG001309.1
Alligator sinensis
Alligator_sinensis_CCG001309.1
I
0.780
Alligator_sinensis_CCG013371.1
Alligator sinensis
Alligator_sinensis_CCG013371.1
N
0.757
Alligator_sinensis_CCG017491.1
Alligator sinensis
Alligator_sinensis_CCG017491.1
I
0.760
AMEC017016
Anopheles melas
AMEC017016
N
0.757
AMEM000352
Anopheles merus
AMEM000352
N
0.757
ANCCEY_14935
Ancylostoma ceylanicum
ANCCEY_14935
N
0.767
AQUA001972
Anopheles quadriannulatus
AQUA001972
N
0.757
BGLB001603
Biomphalaria glabrata
BGLB001603
N
0.757
Bm11731
Brugia malayi
Bm11731
N
0.757
Bm12319
Brugia malayi
Bm12319
N
0.757
Brh_R001625
Buceros rhinoceros
Brh_R001625
N
0.757
Brh_R008046
Buceros rhinoceros
Brh_R008046
I
0.780
Brh_R008554
Buceros rhinoceros
Brh_R008554
N
0.757
Brh_R012523
Buceros rhinoceros
Brh_R012523
I
0.760
Cflo_00615--XP_001121679.1_APIME
Camponotus floridanus
Cflo_00615--XP_001121679.1_APIME
N
0.757
Cflo_01443--XP_624772.1_APIME
Camponotus floridanus
Cflo_01443--XP_624772.1_APIME
N
0.757
Cflo_16445--XP_624772.1_APIME
Camponotus floridanus
Cflo_16445--XP_624772.1_APIME
N
0.757
CLEC000374
Cimex lectularius
CLEC000374
N
0.757
CLEC013286
Cimex lectularius
CLEC013286
N
0.757
Cmyd_10010871
Chelonia mydas
Cmyd_10010871
I
0.780
CPIJ012901
Culex quinquefasciatus
CPIJ012901
N
0.757
CpipJ_CPIJ012901
Culex pipiens
CpipJ_CPIJ012901
N
0.757
D915_00578
Fasciola hepatica
D915_00578
I
0.763
DAPPUDRAFT_312628
Daphnia pulex
DAPPUDRAFT_312628
I
0.760
ENSAMEG00000011355
Ailuropoda melanoleuca
ENSAMEG00000011355
I
0.776
ENSAMEG00000014775
Ailuropoda melanoleuca
ENSAMEG00000014775
I
0.780
ENSAMXG00000004794
Astyanax mexicanus
ENSAMXG00000004794
I
0.776
ENSAMXG00000011768
Astyanax mexicanus
ENSAMXG00000011768
I
0.776
ENSAPLG00000004145
Anas platyrhynchos
ENSAPLG00000004145
I
0.764
ENSAPLG00000009146
Anas platyrhynchos
ENSAPLG00000009146
I
0.760
ENSBTAG00000048085
Bos taurus
ENSBTAG00000048085
N
0.757
ENSBTAP00000019142-D1
Bos grunniens
ENSBTAP00000019142-D1
I
0.780
ENSCING00000006082
Ciona intestinalis
ENSCING00000006082
I
0.793
ENSCSAG00000007163
Chlorocebus sabaeus
ENSCSAG00000007163
I
0.776
ENSCSAG00000011934
Chlorocebus sabaeus
ENSCSAG00000011934
I
0.780
ENSCSAVG00000009024
Ciona savignyi
ENSCSAVG00000009024
I
0.806
ENSDORG00000012974
Dipodomys ordii
ENSDORG00000012974
I
0.792
ENSFALG00000005917
Ficedula albicollis
ENSFALG00000005917
I
0.780
ENSFALG00000006648
Ficedula albicollis
ENSFALG00000006648
I
0.760
ENSFALG00000014565
Ficedula albicollis
ENSFALG00000014565
N
0.757
ENSGALG00000016063
Gallus gallus
ENSGALG00000016063
I
0.764
ENSGALG00000028383
Gallus gallus
ENSGALG00000028383
N
0.757
ENSGMOG00000003463
Gadus morhua
ENSGMOG00000003463
I
0.773
ENSGMOG00000011144
Gadus morhua
ENSGMOG00000011144
I
0.776
ENSLACG00000010260
Latimeria chalumnae
ENSLACG00000010260
I
0.760
ENSLACG00000013560
Latimeria chalumnae
ENSLACG00000013560
I
0.776
ENSLOCG00000003791
Lepisosteus oculatus
ENSLOCG00000003791
I
0.767
ENSLOCG00000016837
Lepisosteus oculatus
ENSLOCG00000016837
I
0.760
ENSMEUG00000000662
Macropus eugenii
ENSMEUG00000000662
I
0.780
ENSMEUG00000015111
Macropus eugenii
ENSMEUG00000015111
I
0.756
ENSMICG00000002285
Microcebus murinus
ENSMICG00000002285
I
0.780
ENSMPUG00000013287
Mustela putorius furo
ENSMPUG00000013287
I
0.760
ENSMPUG00000015132
Mustela putorius furo
ENSMPUG00000015132
I
0.780
ENSNLEG00000003646
Nomascus leucogenys
ENSNLEG00000003646
I
0.780
ENSNLEG00000013701
Nomascus leucogenys
ENSNLEG00000013701
I
0.776
ENSOARG00000015319
Ovis aries
ENSOARG00000015319
I
0.776
ENSOARG00000017131
Ovis aries
ENSOARG00000017131
I
0.780
ENSOARG00000018838
Ovis aries
ENSOARG00000018838
N
0.757
ENSONIG00000003704
Oreochromis niloticus
ENSONIG00000003704
I
0.776
ENSONIG00000016428
Oreochromis niloticus
ENSONIG00000016428
I
0.770
ENSONIG00000018808
Oreochromis niloticus
ENSONIG00000018808
I
0.776
ENSOPRG00000000197
Ochotona princeps
ENSOPRG00000000197
N
0.757
ENSORLG00000010690
Oryzias latipes
ENSORLG00000010690
I
0.760
ENSP00000285407
Macaca fascicularis
ENSP00000285407
I
0.780
ENSP00000307023
Macaca fascicularis
ENSP00000307023
I
0.776
ENSP00000307023-D1
Bos grunniens
ENSP00000307023-D1
I
0.776
ENSPANG00000008644
Papio anubis
ENSPANG00000008644
I
0.776
ENSPANG00000009227
Papio anubis
ENSPANG00000009227
I
0.780
ENSPFOG00000005130
Poecilia formosa
ENSPFOG00000005130
I
0.792
ENSPFOG00000008405
Poecilia formosa
ENSPFOG00000008405
I
0.760
ENSPFOG00000013334
Poecilia formosa
ENSPFOG00000013334
I
0.766
ENSPFOG00000015451
Poecilia formosa
ENSPFOG00000015451
I
0.757
ENSPFOG00000015744
Poecilia formosa
ENSPFOG00000015744
I
0.776
ENSPPYG00000012659
Pongo abelii
ENSPPYG00000012659
I
0.776
ENSPPYG00000018800
Pongo abelii
ENSPPYG00000018800
I
0.780
ENSPSIG00000010816
Pelodiscus sinensis
ENSPSIG00000010816
I
0.760
ENSPSIG00000012678
Pelodiscus sinensis
ENSPSIG00000012678
I
0.780
ENSSARG00000006987
Sorex araneus
ENSSARG00000006987
N
0.757
ENSSHAG00000001834
Sarcophilus harrisii
ENSSHAG00000001834
N
0.757
ENSSHAG00000005846
Sarcophilus harrisii
ENSSHAG00000005846
I
0.776
ENSSHAG00000018290
Sarcophilus harrisii
ENSSHAG00000018290
I
0.780
ENSSSCG00000027819
Sus scrofa
ENSSSCG00000027819
I
0.780
ENSSTOG00000002442
Ictidomys tridecemlineatus
ENSSTOG00000002442
I
0.776
ENSSTOG00000027022
Ictidomys tridecemlineatus
ENSSTOG00000027022
I
0.780
ENSTSYG00000003347
Tarsius syrichta
ENSTSYG00000003347
I
0.780
ENSTTRG00000010639
Tursiops truncatus
ENSTTRG00000010639
N
0.757
ENSXMAG00000001428
Xiphophorus maculatus
ENSXMAG00000001428
I
0.756
ENSXMAG00000002425
Xiphophorus maculatus
ENSXMAG00000002425
I
0.766
ENSXMAG00000009885
Xiphophorus maculatus
ENSXMAG00000009885
I
0.776
ENSXMAG00000010947
Xiphophorus maculatus
ENSXMAG00000010947
I
0.792
estExt_fgenesh2_pg.C_20012
Branchiostoma floridae
estExt_fgenesh2_pg.C_20012
N
0.757
estExt_fgenesh2_pg.C_5760011
Branchiostoma floridae
estExt_fgenesh2_pg.C_5760011
I
0.784
GA25126
Drosophila pseudoobscura
FBgn0246509
N
0.757
GA28679
Drosophila pseudoobscura
FBgn0250039
N
0.757
GB45040
Apis mellifera
GB45040
I
0.756
Gfo_R006024
Geospiza fortis
Gfo_R006024
I
0.779
HDID_0000086901
Hymenolepis diminuta
HDID_0000086901
N
0.757
HHAL000942-PA
Halyomorpha halys
HHAL000942-PA
N
0.757
HHAL008173-PA
Halyomorpha halys
HHAL008173-PA
N
0.757
Hsal_02965--XP_624772.1_APIME
Harpegnathos saltator
Hsal_02965--XP_624772.1_APIME
N
0.757
ISCW004118
Ixodes scapularis
ISCW004118
N
0.767
KLF1
Echinops telfairi
ENSETEG00000002006
N
0.757
KLF1
Pteropus vampyrus
ENSPVAG00000014711
N
0.767
KLF10
Anolis carolinensis
ENSACAG00000009177
I
0.760
KLF10
Bos taurus
ENSBTAG00000014396
I
0.780
KLF10
Canis familiaris
ENSCAFG00000000638
I
0.780
KLF10
Callithrix jacchus
ENSCJAG00000016069
I
0.780
KLF10
Cavia porcellus
ENSCPOG00000011105
I
0.780
KLF10
Dasypus novemcinctus
ENSDNOG00000017020
I
0.780
Klf10
Dipodomys ordii
ENSDORG00000015269
I
0.780
KLF10
Equus caballus
ENSECAG00000013153
I
0.780
KLF10
Erinaceus europaeus
ENSEEUG00000009077
I
0.796
KLF10
Echinops telfairi
ENSETEG00000016283
I
0.780
KLF10
Felis catus
ENSFCAG00000026958
I
0.780
KLF10
Homo sapiens
ENSG00000155090
D
0.780
KLF10
Gasterosteus aculeatus
ENSGACG00000004632
I
0.762
KLF10
Gorilla gorilla
ENSGGOG00000015206
I
0.780
KLF10
Loxodonta africana
ENSLAFG00000000037
I
0.780
KLF10
Meleagris gallopavo
ENSMGAG00000012319
I
0.764
KLF10
Myotis lucifugus
ENSMLUG00000012969
I
0.780
KLF10
Macaca mulatta
ENSMMUG00000018815
I
0.780
KLF10
Monodelphis domestica
ENSMODG00000005896
I
0.780
Klf10
Mus musculus
ENSMUSG00000037465
I
0.780
KLF10
Ornithorhynchus anatinus
ENSOANG00000013800
I
0.780
KLF10
Oryctolagus cuniculus
ENSOCUG00000016141
I
0.780
KLF10
Otolemur garnettii
ENSOGAG00000014528
I
0.780
KLF10
Ochotona princeps
ENSOPRG00000006656
I
0.780
KLF10
Pan troglodytes
ENSPTRG00000020484
I
0.780
KLF10
Pteropus vampyrus
ENSPVAG00000013271
I
0.780
Klf10
Rattus norvegicus
ENSRNOG00000006118
I
0.780
KLF10
Sus scrofa
ENSSSCG00000027480
I
0.780
KLF10
Tupaia belangeri
ENSTBEG00000007597
N
0.805
KLF10
Taeniopygia guttata
ENSTGUG00000012120
I
0.773
KLF10
Takifugu rubripes
ENSTRUG00000010298
I
0.766
KLF10
Tursiops truncatus
ENSTTRG00000000383
I
0.780
klf10
Xenopus tropicalis
XB-GENE-854761
I
0.763
klf10.L
Xenopus laevis
XB-GENE-17335049
I
0.763
klf10.S
Xenopus laevis
XB-GENE-866571
I
0.760
KLF11
Anolis carolinensis
ENSACAG00000000128
I
0.760
KLF11
Bos taurus
ENSBTAG00000046218
I
0.776
KLF11
Canis familiaris
ENSCAFG00000003405
I
0.792
KLF11
Dasypus novemcinctus
ENSDNOG00000035689
I
0.776
KLF11
Equus caballus
ENSECAG00000015820
I
0.776
KLF11
Erinaceus europaeus
ENSEEUG00000006894
I
0.776
KLF11
Echinops telfairi
ENSETEG00000002915
I
0.780
KLF11
Felis catus
ENSFCAG00000030965
I
0.776
KLF11
Homo sapiens
ENSG00000172059
D
0.776
KLF11
Gasterosteus aculeatus
ENSGACG00000001487
I
0.773
KLF11
Gasterosteus aculeatus
ENSGACG00000008836
I
0.780
KLF11
Gallus gallus
ENSGALG00000016440
I
0.760
KLF11
Gorilla gorilla
ENSGGOG00000012494
I
0.776
KLF11
Loxodonta africana
ENSLAFG00000032182
I
0.776
KLF11
Meleagris gallopavo
ENSMGAG00000014008
I
0.764
KLF11
Myotis lucifugus
ENSMLUG00000002295
I
0.760
KLF11
Macaca mulatta
ENSMMUG00000002054
I
0.776
KLF11
Monodelphis domestica
ENSMODG00000014758
I
0.776
Klf11
Mus musculus
ENSMUSG00000020653
I
0.776
KLF11
Ornithorhynchus anatinus
ENSOANG00000007790
I
0.776
KLF11
Oryctolagus cuniculus
ENSOCUG00000003809
I
0.776
KLF11
Otolemur garnettii
ENSOGAG00000026035
I
0.792
KLF11
Ochotona princeps
ENSOPRG00000013425
I
0.776
KLF11
Oryzias latipes
ENSORLG00000015191
I
0.776
KLF11
Oryzias latipes
ENSORLG00000018102
I
0.776
KLF11
Procavia capensis
ENSPCAG00000011366
I
0.776
KLF11
Pan troglodytes
ENSPTRG00000011645
I
0.776
KLF11
Pteropus vampyrus
ENSPVAG00000017463
I
0.763
Klf11
Rattus norvegicus
ENSRNOG00000054259
I
0.776
KLF11
Sorex araneus
ENSSARG00000004298
I
0.760
KLF11
Tupaia belangeri
ENSTBEG00000008268
I
0.776
KLF11
Taeniopygia guttata
ENSTGUG00000013041
I
0.760
KLF11
Tetraodon nigroviridis
ENSTNIG00000000881
I
0.773
KLF11
Takifugu rubripes
ENSTRUG00000008202
I
0.773
KLF11
Takifugu rubripes
ENSTRUG00000013598
I
0.776
KLF11
Tursiops truncatus
ENSTTRG00000017207
I
0.776
klf11
Xenopus tropicalis
XB-GENE-956858
I
0.760
klf11.L
Xenopus laevis
XB-GENE-956865
I
0.760
klf11.S
Xenopus laevis
XB-GENE-17345045
I
0.760
klf11a
Danio rerio
ENSDARG00000030844
I
0.776
klf11b
Danio rerio
ENSDARG00000013794
I
0.776
KLF12
Oryctolagus cuniculus
ENSOCUG00000004244
N
0.757
KLF3
Procavia capensis
ENSPCAG00000015573
N
0.757
KLF3
Tupaia belangeri
ENSTBEG00000015639
N
0.757
klf4
Danio rerio
ENSDARG00000079922
N
0.757
KLF5
Ochotona princeps
ENSOPRG00000007620
N
0.757
KLF6
Bos taurus
ENSBTAG00000015188
N
0.757
KLF6
Callithrix jacchus
ENSCJAG00000032379
I
0.757
KLF6
Homo sapiens
ENSG00000067082
D
0.757
Klf7
Rattus norvegicus
ENSRNOG00000012961
N
0.757
L798_04124
Zootermopsis nevadensis
L798_04124
N
0.757
LDEC010928
Leptinotarsa decemlineata
LDEC010928
N
0.757
LDEC024398
Leptinotarsa decemlineata
LDEC024398
N
0.757
LLOJ001749
Lutzomyia longipalpis
LLOJ001749
N
0.757
MESCA001789
Megaselia scalaris
MESCA001789
N
0.757
Myotis_brandtii_KLF10_10032162
Myotis brandtii
Myotis_brandtii_KLF10_10032162
I
0.780
Myotis_brandtii_KLF11_10020832
Myotis brandtii
Myotis_brandtii_KLF11_10020832
I
0.760
NEMVEDRAFT_v1g39461
Nematostella vectensis
NEMVEDRAFT_v1g39461
I
0.773
Ocbimv22007603m.g
Octopus bimaculoides
Ocbimv22007603m.g
N
0.757
Ogr04283
Ophisaurus gracilis
Ogr04283
I
0.776
Ogr05338
Ophisaurus gracilis
Ogr05338
N
0.757
PHUM248360
Pediculus humanus
PHUM248360
I
0.765
PHUM399820
Pediculus humanus
PHUM399820
N
0.757
PPAI010678
Phlebotomus papatasi
PPAI010678
N
0.757
Pvit_03838
Pogona vitticeps
Pvit_03838
I
0.764
Pvit_06515
Pogona vitticeps
Pvit_06515
N
0.757
Pvit_14441
Pogona vitticeps
Pvit_14441
I
0.760
RPRC011844
Rhodnius prolixus
RPRC011844
N
0.757
SINV23345
Solenopsis invicta
SINV23345
N
0.757
SMAR000017
Strigamia maritima
SMAR000017
N
0.769
SPU_026418
Strongylocentrotus purpuratus
SPU_026418
I
0.784
Tal_R002680
Tyto alba
Tal_R002680
N
0.757
Tal_R005095
Tyto alba
Tal_R005095
N
0.757
Tal_R007530
Tyto alba
Tal_R007530
I
0.780
Tal_R013154
Tyto alba
Tal_R013154
I
0.760
TC003611
Tribolium castaneum
TC003611
N
0.757
TC014124
Tribolium castaneum
TC014124
I
0.763
tetur19g01530
Tetranychus urticae
tetur19g01530
I
0.773