CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10009617m.g
(
Capsella rubella
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Carubv10009617m.g
T142712_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10009617m
C2H2 ZF
274
295
FSCGKCGKALAVKGDWRTHEKN
Carubv10009617m
C2H2 ZF
294
320
KNCGKLWYCTCGSDFKHKRSLKDHIRS
Links
Other
C2H2 ZF
family TFs
Other
Capsella rubella
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M422DRAFT_253772
Sphaerobolus stellatus
M422DRAFT_253772
N
M422DRAFT_253861
Sphaerobolus stellatus
M422DRAFT_253861
N
M422DRAFT_256037
Sphaerobolus stellatus
M422DRAFT_256037
N
M422DRAFT_266884
Sphaerobolus stellatus
M422DRAFT_266884
N
M422DRAFT_270008
Sphaerobolus stellatus
M422DRAFT_270008
N