CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba02617
(
Panicum virgatum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pavir.Ba02617
T143317_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba02617.1.p
C2H2 ZF
909
929
YQCKICGERFSLEEELRSHTT
Pavir.Ba02617.2.p
C2H2 ZF
798
818
YQCKICGERFSLEEELRSHTT
Links
Other
C2H2 ZF
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Bb01710
Panicum virgatum
Pavir.Bb01710
N
0.827
Si028783m.g
Setaria italica
Si028783m.g
N
0.795