CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Hb00023
(
Panicum virgatum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pavir.Hb00023
T143371_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G53600
M01856_2.00
Arabidopsis thaliana
NNHASWN
NWSTDNN
PBM
Weirauch et al.(2014)
pTH7188
0.765
0.696
AT3G53600
M00858_2.00
Arabidopsis thaliana
NNNNRSWN
NWSYNNNN
PBM
Franco-Zorrilla et al.(2014)
ZAT18
0.765
0.696
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Hb00023.1.p
C2H2 ZF
59
83
FECRTCGRRFATFQALGGHRTSHLR
Pavir.Hb00023.1.p
C2H2 ZF
99
121
HACGACGLGFSTGQALGGHMRRH
Links
Other
C2H2 ZF
family TFs
Other
Panicum virgatum
TFs
283 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL005892
Aedes aegypti
AAEL005892
N
AALB010202
Anopheles albimanus
AALB010202
N
Aan_R012372
Calypte anna
Aan_R012372
N
Aan_R014419
Calypte anna
Aan_R014419
N
AATE010533
Anopheles atroparvus
AATE010533
N
ACEP13151
Atta cephalotes
ACEP13151
N
ACUA017310
Anopheles culicifacies
ACUA017310
N
AFAF012856
Anopheles farauti
AFAF012856
N
Afo_R003052
Aptenodytes forsteri
Afo_R003052
N
AGAP010516
Anopheles gambiae
AGAP010516
N
Alligator_sinensis_CCG008692.1
Alligator sinensis
Alligator_sinensis_CCG008692.1
N
AMEM011646
Anopheles merus
AMEM011646
N
ASTEI07114
Anopheles stephensi
ASTEI07114
N
Brh_R010325
Buceros rhinoceros
Brh_R010325
N
CapteG227287
Capitella teleta
CapteG227287
N
Cflo_01591--XP_624136.2_APIME
Camponotus floridanus
Cflo_01591--XP_624136.2_APIME
N
CGI_10028872
Crassostrea gigas
CGI_10028872
N
Cmyd_10009010
Chelonia mydas
Cmyd_10009010
N
DAPPUDRAFT_51670
Daphnia pulex
DAPPUDRAFT_51670
N
ZNF367
Anolis carolinensis
ENSACAG00000012929
N
ENSAMEG00000012079
Ailuropoda melanoleuca
ENSAMEG00000012079
N
ENSAMXG00000021081
Astyanax mexicanus
ENSAMXG00000021081
N
ZNF367
Bos taurus
ENSBTAG00000006587
N
ZNF367
Canis familiaris
ENSCAFG00000001213
N
ZNF367
Choloepus hoffmanni
ENSCHOG00000008195
N
zf(c2h2)-76
Ciona intestinalis
ENSCING00000023622
N
ZNF367
Callithrix jacchus
ENSCJAG00000012580
N
ZNF367
Cavia porcellus
ENSCPOG00000001515
N
ENSCSAG00000006700
Chlorocebus sabaeus
ENSCSAG00000006700
N
ENSCSAVG00000003922
Ciona savignyi
ENSCSAVG00000003922
N
znf367
Danio rerio
ENSDARG00000021086
N
ZNF367
Dasypus novemcinctus
ENSDNOG00000035249
N
ENSDORG00000010750
Dipodomys ordii
ENSDORG00000010750
N
ENSECAG00000009173
Equus caballus
ENSECAG00000009173
N
ZNF367
Echinops telfairi
ENSETEG00000018547
N
ENSFALG00000003343
Ficedula albicollis
ENSFALG00000003343
N
ZNF367
Felis catus
ENSFCAG00000015587
N
ZNF367
Homo sapiens
ENSG00000165244
N
znf367
Gasterosteus aculeatus
ENSGACG00000006715
N
ZNF367
Gallus gallus
ENSGALG00000012629
N
ZNF367
Gorilla gorilla
ENSGGOG00000012699
N
ENSGMOG00000007617
Gadus morhua
ENSGMOG00000007617
N
ENSLACG00000011483
Latimeria chalumnae
ENSLACG00000011483
N
ZNF367
Loxodonta africana
ENSLAFG00000010427
N
ENSLOCG00000009209
Lepisosteus oculatus
ENSLOCG00000009209
N
ENSMEUG00000009287
Macropus eugenii
ENSMEUG00000009287
N
ZNF367
Meleagris gallopavo
ENSMGAG00000006781
N
ENSMICG00000002011
Microcebus murinus
ENSMICG00000002011
N
ZNF367
Myotis lucifugus
ENSMLUG00000017279
N
ZNF367
Macaca mulatta
ENSMMUG00000007996
N
ZNF367
Monodelphis domestica
ENSMODG00000000499
N
ENSMPUG00000006868
Mustela putorius furo
ENSMPUG00000006868
N
Zfp367
Mus musculus
ENSMUSG00000044934
N
ENSNLEG00000016813
Nomascus leucogenys
ENSNLEG00000016813
N
ENSOCUG00000023005
Oryctolagus cuniculus
ENSOCUG00000023005
N
ZNF367
Otolemur garnettii
ENSOGAG00000004337
N
ENSONIG00000015208
Oreochromis niloticus
ENSONIG00000015208
N
ENSOPRG00000011725
Ochotona princeps
ENSOPRG00000011725
N
znf367
Oryzias latipes
ENSORLG00000003923
N
ENSP00000364405
Macaca fascicularis
ENSP00000364405
N
ENSP00000364405-D1
Bos grunniens
ENSP00000364405-D1
N
ENSPANG00000024635
Papio anubis
ENSPANG00000024635
N
ENSPFOG00000007837
Poecilia formosa
ENSPFOG00000007837
N
ENSPPYG00000019416
Pongo abelii
ENSPPYG00000019416
N
ENSPSIG00000011709
Pelodiscus sinensis
ENSPSIG00000011709
N
ZNF367
Pan troglodytes
ENSPTRG00000021153
N
ZNF367
Pteropus vampyrus
ENSPVAG00000007651
N
Zfp367
Rattus norvegicus
ENSRNOG00000027234
N
ZNF367
Sorex araneus
ENSSARG00000000827
N
ENSSSCG00000010933
Sus scrofa
ENSSSCG00000010933
N
ENSSTOG00000005655
Ictidomys tridecemlineatus
ENSSTOG00000005655
N
ZNF367
Tupaia belangeri
ENSTBEG00000002215
N
ZNF367
Taeniopygia guttata
ENSTGUG00000000513
N
znf367
Tetraodon nigroviridis
ENSTNIG00000016674
N
znf367
Takifugu rubripes
ENSTRUG00000015325
N
ZNF367
Vicugna pacos
ENSVPAG00000002182
N
ENSXMAG00000015989
Xiphophorus maculatus
ENSXMAG00000015989
N
estExt_fgenesh2_pg.C_2650031
Branchiostoma floridae
estExt_fgenesh2_pg.C_2650031
N
GB46246
Apis mellifera
GB46246
N
Gfo_R009072
Geospiza fortis
Gfo_R009072
N
ISCW000539
Ixodes scapularis
ISCW000539
N
L798_11919
Zootermopsis nevadensis
L798_11919
N
LDEC003543
Leptinotarsa decemlineata
LDEC003543
N
LotgiG165679
Lottia gigantea
LotgiG165679
N
Myotis_brandtii_Znf367_10015819
Myotis brandtii
Myotis_brandtii_Znf367_10015819
N
NEMVEDRAFT_v1g106775
Nematostella vectensis
NEMVEDRAFT_v1g106775
N
NV15465
Nasonia vitripennis
NV15465
N
Pvit_09074
Pogona vitticeps
Pvit_09074
N
Sakowv30026002m.g
Saccoglossus kowalevskii
Sakowv30026002m.g
N
SINV17846
Solenopsis invicta
SINV17846
N
TC016055
Tribolium castaneum
TC016055
N
TriadG15889
Trichoplax adhaerens
TriadG15889
N
znf367
Xenopus tropicalis
XB-GENE-986040
N
znf367.S
Xenopus laevis
XB-GENE-986041
N
YQE_09141
Dendroctonus ponderosae
YQE_09141
N