CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0111s0170
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.0111s0170
T143464_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0111s0170.1.p
C2H2 ZF
252
273
FTCRKCGKPFAVKGDWRTHEKN
SapurV1A.0111s0170.1.p
C2H2 ZF
272
301
KNCGKIWYCICGSDFKHKRSLRDHTKVFGH
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.2210s0020
Salix purpurea
SapurV1A.2210s0020
N
0.827
Gorai.004G065400
Gossypium raimondii
Gorai.004G065400
N
0.798
Cla015481
Citrullus lanatus
Cla015481
N
0.792
Cucsa.050260
Cucumis sativus
Cucsa.050260
N
0.792
Cucsa.065460
Cucumis sativus
Cucsa.065460
N
0.792
evm.TU.contig_31438
Carica papaya
evm.TU.contig_31438
N
0.788
GLYMA13G01720
Glycine max
GLYMA13G01720
N
0.784
GLYMA14G35140
Glycine max
GLYMA14G35140
N
0.784
Ca_27078
Cicer arietinum
Ca_27078
N
0.784
Eucgr.J01266
Eucalyptus grandis
Eucgr.J01266
N
0.782
GSMUA_Achr3G03850_001
Musa acuminata
GSMUA_Achr3G03850_001
N
0.774
GSMUA_Achr4G01560_001
Musa acuminata
GSMUA_Achr4G01560_001
N
0.774
PGSC0003DMG400006808
Solanum tuberosum
PGSC0003DMG400006808
N
0.774
POPTR_0001s27490
Populus trichocarpa
POPTR_0001s27490
N
0.774
POPTR_0009s06700
Populus trichocarpa
POPTR_0009s06700
N
0.774
Solyc01g087050.2
Solanum lycopersicum
Solyc01g087050.2
N
0.774
TCM_005892
Theobroma cacao
TCM_005892
N
0.774
cassava39829.m1
Manihot esculenta
cassava39829.m1
N
0.774
Gorai.004G037000
Gossypium raimondii
Gorai.004G037000
N
0.774
Gorai.007G177300
Gossypium raimondii
Gorai.007G177300
N
0.774
Lus10029525.g
Linum usitatissimum
Lus10029525.g
N
0.774
Lus10039613.g
Linum usitatissimum
Lus10039613.g
N
0.774
SapurV1A.0445s0120
Salix purpurea
SapurV1A.0445s0120
N
0.769
SapurV1A.0445s0140
Salix purpurea
SapurV1A.0445s0140
N
0.769
GLYMA08G16390
Glycine max
GLYMA08G16390
N
0.768
GLYMA12G36660
Glycine max
GLYMA12G36660
N
0.768
GLYMA13G27371
Glycine max
GLYMA13G27371
N
0.768
GLYMA15G42870
Glycine max
GLYMA15G42870
N
0.768
GSMUA_Achr9G12600_001
Musa acuminata
GSMUA_Achr9G12600_001
N
0.768
POPTR_0001s05630
Populus trichocarpa
POPTR_0001s05630
N
0.768
30061.m000294
Ricinus communis
30061.m000294
N
0.768
mgf022319m
Mimulus guttatus
mgf022319m
N
0.768
PGSC0003DMG400007112
Solanum tuberosum
PGSC0003DMG400007112
N
0.764
Aquca_004_00109
Aquilegia coerulea
Aquca_004_00109
N
0.764
Aquca_006_00227
Aquilegia coerulea
Aquca_006_00227
N
0.764
Aquca_040_00077
Aquilegia coerulea
Aquca_040_00077
N
0.764
MDP0000144266
Malus domestica
MDP0000144266
N
0.763
orange1.1g037234m.g
Citrus sinensis
orange1.1g037234m.g
N
0.763
Bo5g081360
Brassica oleracea
Bo5g081360
N
0.762
Cla008675
Citrullus lanatus
Cla008675
N
0.762
29908.m006047
Ricinus communis
29908.m006047
N
0.761
cassava44390.m1
Manihot esculenta
cassava44390.m1
N
0.761
MDP0000142494
Malus domestica
MDP0000142494
N
0.761
BGIOSGA031001
Oryza indica
BGIOSGA031001
N
0.758
BRADI3G39820
Brachypodium distachyon
BRADI3G39820
N
0.758
GLYMA11G19060
Glycine max
GLYMA11G19060
N
0.758
GLYMA12G09400
Glycine max
GLYMA12G09400
N
0.758
GLYMA12G30930
Glycine max
GLYMA12G30930
N
0.758
GLYMA13G39370
Glycine max
GLYMA13G39370
N
0.758
GRMZM2G071101
Zea mays
GRMZM2G071101
N
0.758
GRMZM2G445684
Zea mays
GRMZM2G445684
N
0.758
LPERR08G16620
Leersia perrieri
LPERR08G16620
N
0.758
LPERR09G10700
Leersia perrieri
LPERR09G10700
N
0.758
OB08G26650
Oryza brachyantha
OB08G26650
N
0.758
OBART08G19670
Oryza barthii
OBART08G19670
N
0.758
OGLUM08G20830
Oryza glumaepatula
OGLUM08G20830
N
0.758
OGLUM09G15150
Oryza glumaepatula
OGLUM09G15150
N
0.758
OMERI08G16450
Oryza meridionalis
OMERI08G16450
N
0.758
OMERI09G11270
Oryza meridionalis
OMERI09G11270
N
0.758
ONIVA08G21960
Oryza nivara
ONIVA08G21960
N
0.758
ONIVA09G15100
Oryza nivara
ONIVA09G15100
N
0.758
OPUNC08G17810
Oryza punctata
OPUNC08G17810
N
0.758
OPUNC09G12930
Oryza punctata
OPUNC09G12930
N
0.758
ORGLA08G0173000
Oryza glaberrima
ORGLA08G0173000
N
0.758
ORGLA09G0111700
Oryza glaberrima
ORGLA09G0111700
N
0.758
ORUFI09G15680
Oryza rufipogon
ORUFI09G15680
N
0.758
OS08G0504000
Oryza sativa
OS08G0504000
N
0.758
OS09G0485600
Oryza sativa
OS09G0485600
N
0.758
POPTR_0004s19460
Populus trichocarpa
POPTR_0004s19460
N
0.758
POPTR_0009s14590
Populus trichocarpa
POPTR_0009s14590
N
0.758
PRUPE_ppa023619mg
Prunus persica
PRUPE_ppa023619mg
N
0.758
Sb07g028010
Sorghum bicolor
Sb07g028010
N
0.758
Si013819m.g
Setaria italica
Si013819m.g
N
0.758
TCM_041441
Theobroma cacao
TCM_041441
N
0.758
WIP3
Vitis vinifera
VIT_06s0080g00270
N
0.758
Ca_07051
Cicer arietinum
Ca_07051
N
0.758
Pm001374
Prunus mume
Pm001374
N
0.758
30055.m001542
Ricinus communis
30055.m001542
N
0.758
cassava13451.valid.m1
Manihot esculenta
cassava13451.valid.m1
N
0.758
cassava16214.m1
Manihot esculenta
cassava16214.m1
N
0.758
Ciclev10028757m.g
Citrus clementina
Ciclev10028757m.g
N
0.758
Eucgr.B03870
Eucalyptus grandis
Eucgr.B03870
N
0.758
evm.TU.contig_35924
Carica papaya
evm.TU.contig_35924
N
0.758
gene22042-v1.0-hybrid
Fragaria vesca
gene22042-v1.0-hybrid
N
0.758
Gorai.001G121700
Gossypium raimondii
Gorai.001G121700
N
0.758
Gorai.006G111400
Gossypium raimondii
Gorai.006G111400
N
0.758
Lus10004887.g
Linum usitatissimum
Lus10004887.g
N
0.758
Lus10020597.g
Linum usitatissimum
Lus10020597.g
N
0.758
MDP0000131949
Malus domestica
MDP0000131949
N
0.758
MDP0000300013
Malus domestica
MDP0000300013
N
0.758
orange1.1g039549m.g
Citrus sinensis
orange1.1g039549m.g
N
0.758
Pavir.Fa00506
Panicum virgatum
Pavir.Fa00506
N
0.758
Pavir.Fb01879
Panicum virgatum
Pavir.Fb01879
N
0.758
SapurV1A.0080s0360
Salix purpurea
SapurV1A.0080s0360
N
0.758
SapurV1A.0219s0040
Salix purpurea
SapurV1A.0219s0040
N
0.758