CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0486s0080
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.0486s0080
T143494_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0486s0080.1.p
C2H2 ZF
1574
1597
YQCDIDGCTMGFGSKQELAMHKRN
SapurV1A.0486s0080.1.p
C2H2 ZF
1598
1621
ICPVKGCGKKFFSHKYLVQHRRVH
SapurV1A.0486s0080.1.p
C2H2 ZF
1657
1683
YVCAEEGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
0.827
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.781
30147.m013814
Ricinus communis
30147.m013814
N
0.781
cassava3225.m1
Manihot esculenta
cassava3225.m1
N
0.777
Ca_08787
Cicer arietinum
Ca_08787
N
0.768
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
0.768
TCM_014549
Theobroma cacao
TCM_014549
N
0.767
GLYMA04G36630
Glycine max
GLYMA04G36630
N
0.764
Cucsa.391680
Cucumis sativus
Cucsa.391680
N
0.764
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.760
GLYMA06G18300
Glycine max
GLYMA06G18300
N
0.757