LDEC009536 (Leptinotarsa decemlineata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LDEC009536 T144650_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.797 0.913
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.797 0.913
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.797 0.913
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.797 0.913
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.797 0.913
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.797 0.913
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.797 0.913
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.797 0.913
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.794 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC009536-PA C2H2 ZF 548 570
LDEC009536-PA C2H2 ZF 576 598
LDEC009536-PA C2H2 ZF 604 627

Links

Other C2H2 ZF family TFs
Other Leptinotarsa decemlineata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI47548 Acyrthosiphon pisum ACYPI47548 I
BGIBMGA007697 Bombyx mori BGIBMGA007697 I
brk Drosophila melanogaster FBgn0024250 D
brk Drosophila pseudoobscura FBgn0081927 I
brk Drosophila ananassae FBgn0098143 I
brk Drosophila willistoni FBgn0218144 I
GD16839 Drosophila simulans FBgn0188424 I
GE15708 Drosophila yakuba FBgn0233275 I
GH24261 Drosophila grimshawi FBgn0131717 I
GI15944 Drosophila mojavensis FBgn0138693 I
GJ14850 Drosophila virilis FBgn0202054 I
GL14695 Drosophila persimilis FBgn0152299 I
GM17513 Drosophila sechellia FBgn0172421 I
KGM_03400 Danaus plexippus KGM_03400 I
MDOA006277 Musca domestica MDOA006277 I
MESCA001664 Megaselia scalaris MESCA001664 I