sall1 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-491393 T145439_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AAI27275 C2H2 ZF 462 484
AAI27275 C2H2 ZF 490 512
AAI27275 C2H2 ZF 713 734
AAI27275 C2H2 ZF 740 762
AAI27275 C2H2 ZF 772 794
AAI27275 C2H2 ZF 1007 1029
AAI27275 C2H2 ZF 1035 1057
AAI27275 C2H2 ZF 1140 1162
AAI27275 C2H2 ZF 1168 1190

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
sall1.L Xenopus laevis XB-GENE-866060 N 0.825
SALL1 Otolemur garnettii ENSOGAG00000027316 N 0.820
Sall1 Rattus norvegicus ENSRNOG00000013907 N 0.820
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N 0.815
sall1a Gasterosteus aculeatus ENSGACG00000016702 N 0.807
ENSLOCG00000007283 Lepisosteus oculatus ENSLOCG00000007283 N 0.807
sall1a Oryzias latipes ENSORLG00000013827 N 0.806
ENSPFOG00000015799 Poecilia formosa ENSPFOG00000015799 N 0.806
ENSXMAG00000016273 Xiphophorus maculatus ENSXMAG00000016273 N 0.806
ENSONIG00000002831 Oreochromis niloticus ENSONIG00000002831 N 0.800
sall1a Tetraodon nigroviridis ENSTNIG00000004257 N 0.800
sall1a Takifugu rubripes ENSTRUG00000008950 N 0.800
Cmyd_10010411 Chelonia mydas Cmyd_10010411 N 0.773
XP_002936493 Xenopus tropicalis XP_002936493 N 0.773
XP_002936494 Xenopus tropicalis XP_002936494 N 0.773
XP_002936495 Xenopus tropicalis XP_002936495 N 0.773
sall1b Danio rerio ENSDARG00000075891 N 0.771
SALL3 Loxodonta africana ENSLAFG00000013521 N 0.770
SALL3 Myotis lucifugus ENSMLUG00000010582 N 0.770
Myotis_brandtii_Sall3_10034211 Myotis brandtii Myotis_brandtii_Sall3_10034211 N 0.770
Afo_R009325 Aptenodytes forsteri Afo_R009325 N 0.768
Alligator_sinensis_CCG003694.1 Alligator sinensis Alligator_sinensis_CCG003694.1 N 0.768
Brh_R007854 Buceros rhinoceros Brh_R007854 N 0.768
Gfo_R000617 Geospiza fortis Gfo_R000617 N 0.768
Ogr15828 Ophisaurus gracilis Ogr15828 N 0.768
Tal_R008175 Tyto alba Tal_R008175 N 0.768
SALL3 Procavia capensis ENSPCAG00000006522 N 0.767
SALL3 Dasypus novemcinctus ENSDNOG00000025483 N 0.766
Sall3 Rattus norvegicus ENSRNOG00000026116 N 0.766
ENSP00000299466-D1 Bos grunniens ENSP00000299466-D1 N 0.765
SALL3 Callithrix jacchus ENSCJAG00000007332 N 0.764
ENSCSAG00000018244 Chlorocebus sabaeus ENSCSAG00000018244 N 0.764
SALL3 Homo sapiens ENSG00000256463 N 0.764
SALL3 Gorilla gorilla ENSGGOG00000008127 N 0.764
SALL3 Macaca mulatta ENSMMUG00000000286 N 0.764
SALL3 Otolemur garnettii ENSOGAG00000031681 N 0.764
SALL3 Sus scrofa ENSSSCG00000004858 N 0.764