CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001789201
(
Haemonchus placei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPLM_0001789201
T154291_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
blmp-1
M08103_2.00
Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR
ChIP-seq
Mathelier et al.(2014)
MA0537.1
0.797
0.904
blmp-1
M08195_2.00
Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB
ChIP-seq
Contrino et al.(2012)
Mw137
0.797
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001789201-mRNA-1
C2H2 ZF
557
579
YACKECHKTFGQLSNLKVHVRTH
HPLM_0001789201-mRNA-1
C2H2 ZF
585
607
FKCTVCGKEFTQLAHLQKHNLVH
HPLM_0001789201-mRNA-1
C2H2 ZF
613
635
HRCDICDKRFSSTSNLKTHLRLH
HPLM_0001789201-mRNA-1
C2H2 ZF
641
663
YACDVCSAKFTQYVHLRLHKRLH
HPLM_0001789201-mRNA-1
C2H2 ZF
669
690
YACMSCGKKYISPSGLRTHWKT
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus placei
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG33281
Fusarium solani
NechaG33281
N
MAC_08428
Metarhizium acridum
MAC_08428
N
MAM_03823
Metarhizium album
MAM_03823
N
MANI_015772
Metarhizium anisopliae
MANI_015772
N
MGU_01103
Metarhizium guizhouense
MGU_01103
N
MAJ_01803
Metarhizium majus
MAJ_01803
N
X797_005238
Metarhizium robertsii
X797_005238
N
e_gw1.18.1110.1
Nectria haematococca
e_gw1.18.1110.1
N
UV8b_7331
Ustilaginoidea virens
UV8b_7331
N