CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000842401
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0000842401
T155085_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000842401-mRNA-1
C2H2 ZF
3
30
FCSECGASYGDNTSFSQHFIEQHLRLQH
NBR_0000842401-mRNA-1
C2H2 ZF
30
52
HLCTVCGQTFDTQKEFTEHVLAH
NBR_0000842401-mRNA-1
C2H2 ZF
59
82
LECASCHIAFESRELLAMHVQLVH
NBR_0000842401-mRNA-1
C2H2 ZF
141
163
QKCGICKKLMVSRFQLNVHLMEH
NBR_0000842401-mRNA-1
C2H2 ZF
168
190
CCPHCLRPFALAQQLLSHVAEEH
NBR_0000842401-mRNA-1
C2H2 ZF
202
224
HSCEICDETFRFAIQLENHVLQH
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
0 Related TFs
">No related TF found