CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g03569
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g03569
T155330_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t03569-RA
C2H2 ZF
223
244
MQCPTCGLVLYRHNFGTHYRIH
nLs.2.1.2.t03569-RA
C2H2 ZF
250
272
FVCTYCQKRFRTTSALKVHVRAH
nLs.2.1.2.t03569-RA
C2H2 ZF
278
301
YSCPKCSYCCITKRNLDRHVINNH
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_18607
Loa loa
LOAG_18607
N
0.791
ALUE_0001410701
Ascaris lumbricoides
ALUE_0001410701
N
0.779
ASU_06946
Ascaris suum
ASU_06946
N
0.779
ASIM_0001693701
Anisakis simplex
ASIM_0001693701
N
0.775
DME_0000558601
Dracunculus medinensis
DME_0000558601
N
0.763