CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PXEA_0000808001
(
Protopolystoma xenopodis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PXEA_0000808001
T155794_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0000808001-mRNA-1
C2H2 ZF
945
969
HVCPFGSCAKAYSKSSHLKAHMRVH
PXEA_0000808001-mRNA-1
C2H2 ZF
975
999
FPCDWAGCAWRFARSDELTRHYRKH
PXEA_0000808001-mRNA-1
C2H2 ZF
1005
1027
FACRVCQRAFARSDHLTLHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Protopolystoma xenopodis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0000415601
Spirometra erinaceieuropaei
SPER_0000415601
N
0.807
SSLN_0000326401
Schistocephalus solidus
SSLN_0000326401
N
0.807
ECANG7_02206
Echinococcus canadensis
ECANG7_02206
N
0.788
EmuJ_000425100
Echinococcus multilocularis
EmuJ_000425100
N
0.788
HDID_0000765101
Hymenolepis diminuta
HDID_0000765101
N
0.788
HmN_000820000
Hymenolepis microstoma
HmN_000820000
N
0.788
HNAJ_0000435901
Hymenolepis nana
HNAJ_0000435901
N
0.788
TsM_000587400
Taenia solium
TsM_000587400
N
0.788
TTAC_0001070001
Hydatigera taeniaeformis
TTAC_0001070001
N
0.788
Smp_018170
Schistosoma mansoni
Smp_018170
I
0.787
Sjc_0075320
Schistosoma japonicum
Sjc_0075320
I
0.787
csin107779
Clonorchis sinensis
csin107779
I
0.787
SCUD_0001319701
Schistosoma curassoni
SCUD_0001319701
I
0.787
SMRZ_0002428501
Schistosoma margrebowiei
SMRZ_0002428501
I
0.787
SMTD_0001143301
Schistosoma mattheei
SMTD_0001143301
I
0.787
SROB_0001285401
Schistosoma rodhaini
SROB_0001285401
I
0.787
T265_11442
Opisthorchis viverrini
T265_11442
I
0.787
TRE_0000459601
Trichobilharzia regenti
TRE_0000459601
I
0.787
MCOS_0000678201
Mesocestoides corti
MCOS_0000678201
N
0.784
CBG05624
Caenorhabditis briggsae
CBG05624
N
0.760
CBN09052
Caenorhabditis brenneri
CBN09052
N
0.760
CRE21162
Caenorhabditis remanei
CRE21162
N
0.760
klf-2
Caenorhabditis elegans
WBGene00009998
N
0.760
D915_04370
Fasciola hepatica
D915_04370
I
0.760