CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold1098-EXSNAP2012.1
(
Pristionchus exspectatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
scaffold1098-EXSNAP2012.1
T155990_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold1098-EXSNAP2012.1
C2H2 ZF
264
287
VTCDMCGKSYCDKGALKIHTSAVH
scaffold1098-EXSNAP2012.1
C2H2 ZF
293
315
MCTVPGCTKEFTSRRSRNRHSKN
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus exspectatus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_18840
Ancylostoma caninum
ANCCAN_18840
N
0.759
ANCDUO_15583
Ancylostoma duodenale
ANCDUO_15583
N
0.759
Hba_07323
Heterorhabditis bacteriophora
Hba_07323
N
0.759
HCOI00051800
Haemonchus contortus
HCOI00051800
N
0.759
HPBE_0000946001
Heligmosomoides bakeri
HPBE_0000946001
N
0.759
NECAME_09957
Necator americanus
NECAME_09957
N
0.759
SVUK_0000102101
Strongylus vulgaris
SVUK_0000102101
N
0.759
Minc05254
Meloidogyne incognita
Minc05254
N
0.757
nRc.2.0.1.g39124
Romanomermis culicivorax
nRc.2.0.1.g39124
N
0.757