CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000218201
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0000218201
T156901_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000218201-mRNA-1
C2H2 ZF
287
311
FICGISSCNKRFVRIDELKRHQRTH
SROB_0000218201-mRNA-1
C2H2 ZF
317
339
FICDICGKGFTRSDHLMTHRRTH
SROB_0000218201-mRNA-1
C2H2 ZF
345
367
YECKICDRRFARSDERNRHTKTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_134870
Schistosoma mansoni
Smp_134870
N
0.827
A_08011
Schistosoma haematobium
A_08011
N
0.827
SCUD_0000264601
Schistosoma curassoni
SCUD_0000264601
N
0.827
SMRZ_0000176601
Schistosoma margrebowiei
SMRZ_0000176601
N
0.827
SMTD_0000035801
Schistosoma mattheei
SMTD_0000035801
N
0.827
Sjc_0007560
Schistosoma japonicum
Sjc_0007560
N
0.811
TRE_0001399901
Trichobilharzia regenti
TRE_0001399901
N
0.787
D915_06786
Fasciola hepatica
D915_06786
N
0.764