CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000285501
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0000285501
T156905_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000285501-mRNA-1
C2H2 ZF
452
479
HTCYWKDCIRDGKPFKAKYKLVNHIRVH
SROB_0000285501-mRNA-1
C2H2 ZF
485
509
FPCPFSGCMKVFARSENLKIHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_157270
Schistosoma mansoni
Smp_157270
N
0.827
Sjc_0017650
Schistosoma japonicum
Sjc_0017650
N
0.827
A_03860
Schistosoma haematobium
A_03860
N
0.827
SCUD_0001001801
Schistosoma curassoni
SCUD_0001001801
N
0.827
SMRZ_0000377801
Schistosoma margrebowiei
SMRZ_0000377801
N
0.827
SMTD_0002174501
Schistosoma mattheei
SMTD_0002174501
N
0.827
TRE_0000250901
Trichobilharzia regenti
TRE_0000250901
N
0.827
SSLN_0000489601
Schistocephalus solidus
SSLN_0000489601
N
0.820
HmN_000039700
Hymenolepis microstoma
HmN_000039700
N
0.796
BGIBMGA007595
Bombyx mori
BGIBMGA007595
N
0.791
HMEL011725
Heliconius melpomene
HMEL011725
N
0.791
GPUH_0001927301
Gongylonema pulchrum
GPUH_0001927301
N
0.786
CpipJ_CPIJ018949
Culex pipiens
CpipJ_CPIJ018949
N
0.785
AAEL001344
Aedes aegypti
AAEL001344
N
0.785
CPIJ018949
Culex quinquefasciatus
CPIJ018949
N
0.785
AATE014146
Anopheles atroparvus
AATE014146
N
0.785
Myotis_brandtii_ZIC1_10007323
Myotis brandtii
Myotis_brandtii_ZIC1_10007323
N
0.778
LCUP010715
Lucilia cuprina
LCUP010715
N
0.772
MDOA013107
Musca domestica
MDOA013107
N
0.772
MESCA007610
Megaselia scalaris
MESCA007610
N
0.768
TsM_000446100
Taenia solium
TsM_000446100
N
0.767
TTAC_0000847901
Hydatigera taeniaeformis
TTAC_0000847901
N
0.767
D918_08710
Trichuris suis
D918_08710
N
0.762