CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001244101
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001244101
T156939_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001244101-mRNA-1
C2H2 ZF
46
68
YRCEQCGRQFSTCAYLSQHRRIH
SROB_0001244101-mRNA-1
C2H2 ZF
74
96
YACRYCDRRFTQLSHVQQHERIH
SROB_0001244101-mRNA-1
C2H2 ZF
102
124
YRCATCMKSFTQMSNLQSHQRQH
SROB_0001244101-mRNA-1
C2H2 ZF
130
153
YRCEQCFMSFDTKEELDVHVQAKH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0001080801
Schistosoma curassoni
SCUD_0001080801
N
0.825