CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001259301
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001259301
T156942_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001259301-mRNA-1
C2H2 ZF
282
305
FICNQCRKPFTSLTLLCEHTFAVH
SROB_0001259301-mRNA-1
C2H2 ZF
308
330
FRCTICGAQFTQRSNLQRHSLRH
SROB_0001259301-mRNA-1
C2H2 ZF
336
359
FVCKICDKSYYRKDHLVRHIELTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_044870
Schistosoma mansoni
Smp_044870
N
0.827
SMRZ_0000650201
Schistosoma margrebowiei
SMRZ_0000650201
N
0.811
SMTD_0000660401
Schistosoma mattheei
SMTD_0000660401
N
0.811
SCUD_0000104701
Schistosoma curassoni
SCUD_0000104701
N
0.795