SROB_0002127201 (Schistosoma rodhaini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SROB_0002127201 T156974_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M08237_2.00 		Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB		 ChIP-seq
Najafabadi et al.(2015b)
YY1 		0.793 0.901
YY1
M02877_2.00 		Homo sapiens
NVSRCCATNDH
DHNATGGYSBN		 SELEX
Jolma et al.(2013)
YY1_1 		0.793 0.891
YY1
M04406_2.00 		Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK
MGCACDNWHNVYYMAARATGGHN		 SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1 		0.793 0.891
YY1
M04407_2.00 		Homo sapiens
NKMCGCCATYTTGN
NCAARATGGCGKMN		 SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2 		0.793 0.891
YY1
M05845_2.00 		Homo sapiens
NNNVGCCATNWYD
HRWNATGGCBNNN		 SMiLE-seq
Isakova et al.(2017)
YY1 		0.793 0.891
YY1
M08288_2.00 		Homo sapiens
GCCGCCATBKYB
VRMVATGGCGGC		 ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE 		0.793 0.891
YY1
M08085_2.00 		Homo sapiens
KCVGCCATBTTK
MAAVATGGCBGM		 ChIP-seq
Mathelier et al.(2014)
MA0095.2 		0.793 0.891
YY1
M07855_2.00 		Homo sapiens
VNVGCCGCCATBTTK
MAAVATGGCGGCBNB		 ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha 		0.793 0.891
YY1
M07856_2.00 		Homo sapiens
GCSGCCATBTT
AAVATGGCSGC		 ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha 		0.793 0.891
YY1
M07857_2.00 		Homo sapiens
BSNVGCSGCCATBTT
AAVATGGCSGCBNSV		 ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha 		0.793 0.891
YY1
M07858_2.00 		Homo sapiens
NNVGCSGCCATBTTK
MAAVATGGCSGCBNN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha 		0.793 0.891
YY1
M07859_2.00 		Homo sapiens
SBSGCSGCCATBTTK
MAAVATGGCSGCSVS		 ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD 		0.793 0.891
YY1
M07860_2.00 		Homo sapiens
GCCGCCATBTTKNNN
NNNMAAVATGGCGGC		 ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha 		0.793 0.891
YY1
M07861_2.00 		Homo sapiens
VGCSGCCATBTTK
MAAVATGGCSGCB		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD 		0.793 0.891
YY1
M08865_2.00 		Homo sapiens
GCCGCCATYTTK
MAARATGGCGGC		 Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A 		0.793 0.891
Yy1
M08971_2.00 		Mus musculus
GCCGCCATBTTB
VAAVATGGCGGC		 Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A 		0.793 0.891
YY1
M10138_2.00 		Homo sapiens
NVNNDCCATNTWNNVWN
NWBNNWANATGGHNNBN		 Transfac
Matys et al.(2006)
V$YY1_01 		0.793 0.891
YY1
M10139_2.00 		Homo sapiens
NNNSBGCCATCTDSNHTSND
HNSADNSHAGATGGCVSNNN		 Transfac
Matys et al.(2006)
V$YY1_02 		0.793 0.891
YY1
M10140_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_03 		0.793 0.891
YY1
M10141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_07 		0.793 0.891
YY1
M10142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_08 		0.793 0.891
YY1
M10143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q4_01 		0.793 0.891
YY1
M10144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6_02 		0.793 0.891
YY1
M10145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6_03 		0.793 0.891
YY1
M10146_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6 		0.793 0.891
YY1
M04408_2.00 		Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY
RGCACDWWHHGYYMAARATGGHN		 SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1 		0.793 0.891
YY1
M04409_2.00 		Homo sapiens
RKCSGCCATYTTGD
HCAARATGGCSGMY		 SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2 		0.793 0.891
TYY2_RAT
M10385_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY2 		0.785 0.837
pho
M06053_2.00 		Drosophila melanogaster
KNVGCCATDAHNSY
RSNDTHATGGCBNM		 B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521 		0.778 0.870
pho
M06054_2.00 		Drosophila melanogaster
KCCGCCATHWTK
MAWDATGGCGGM		 B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521 		0.778 0.870
pho
M06055_2.00 		Drosophila melanogaster
NKBCGCCATHWTKNN
NNMAWDATGGCGVMN		 B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521 		0.778 0.870
phol
M06144_2.00 		Drosophila melanogaster
CGCCATHTTK
MAADATGGCG		 B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997 		0.757 0.793
phol
M06145_2.00 		Drosophila melanogaster
NKNCGCCATNTTKNN
NNMAANATGGCGNMN		 B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997 		0.757 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0002127201-mRNA-1 C2H2 ZF 118 142
SROB_0002127201-mRNA-1 C2H2 ZF 147 169
SROB_0002127201-mRNA-1 C2H2 ZF 175 199
SROB_0002127201-mRNA-1 C2H2 ZF 205 229

Links

Other C2H2 ZF family TFs
Other Schistosoma rodhaini TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_023990 Schistosoma mansoni Smp_023990 I 0.827
A_01567 Schistosoma haematobium A_01567 I 0.827
D915_12088 Fasciola hepatica D915_12088 I 0.827
ECPE_0001146401 Echinostoma caproni ECPE_0001146401 I 0.827
SCUD_0001683801 Schistosoma curassoni SCUD_0001683801 I 0.827
SMTD_0001163901 Schistosoma mattheei SMTD_0001163901 I 0.827
TRE_0001085901 Trichobilharzia regenti TRE_0001085901 I 0.827
csin103138 Clonorchis sinensis csin103138 I 0.822
T265_10224 Opisthorchis viverrini T265_10224 I 0.822
CapteG223122 Capitella teleta CapteG223122 I 0.805
CGI_10027862 Crassostrea gigas CGI_10027862 I 0.805
LotgiG64240 Lottia gigantea LotgiG64240 I 0.805
Ocbimv22034269m.g Octopus bimaculoides Ocbimv22034269m.g I 0.805
HmN_000280700 Hymenolepis microstoma HmN_000280700 I 0.804
HNAJ_0000292901 Hymenolepis nana HNAJ_0000292901 I 0.804
YY2 Erinaceus europaeus ENSEEUG00000010704 I 0.795
DILT_0000781101 Diphyllobothrium latum DILT_0000781101 I 0.795
CpipJ_CPIJ014689 Culex pipiens CpipJ_CPIJ014689 I 0.793
ACEP14480 Atta cephalotes ACEP14480 I 0.793
ADAC004141 Anopheles darlingi ADAC004141 I 0.793
BGIBMGA011179 Bombyx mori BGIBMGA011179 I 0.793
CPIJ014689 Culex quinquefasciatus CPIJ014689 I 0.793
DAPPUDRAFT_59123 Daphnia pulex DAPPUDRAFT_59123 I 0.793
ENSACAG00000013402 Anolis carolinensis ENSACAG00000013402 I 0.793
ENSAMEG00000011146 Ailuropoda melanoleuca ENSAMEG00000011146 I 0.793
ENSAMXG00000006146 Astyanax mexicanus ENSAMXG00000006146 I 0.793
ENSAMXG00000013302 Astyanax mexicanus ENSAMXG00000013302 I 0.793
ENSAPLG00000003589 Anas platyrhynchos ENSAPLG00000003589 I 0.793
YY1 Bos taurus ENSBTAG00000020819 I 0.793
YY1 Canis familiaris ENSCAFG00000017894 I 0.793
ENSCJAG00000016853 Callithrix jacchus ENSCJAG00000016853 I 0.793
ENSCPOG00000020809 Cavia porcellus ENSCPOG00000020809 I 0.793
yy1b Danio rerio ENSDARG00000027978 I 0.793
yy1a Danio rerio ENSDARG00000042796 I 0.793
ENSDNOG00000023949 Dasypus novemcinctus ENSDNOG00000023949 I 0.793
ENSECAG00000005805 Equus caballus ENSECAG00000005805 I 0.793
YY2 Echinops telfairi ENSETEG00000010999 I 0.793
ENSFALG00000002683 Ficedula albicollis ENSFALG00000002683 I 0.793
YY1 Felis catus ENSFCAG00000024327 I 0.793
YY1 Homo sapiens ENSG00000100811 D 0.793
yy1a Gasterosteus aculeatus ENSGACG00000008573 I 0.793
ENSGACG00000012595 Gasterosteus aculeatus ENSGACG00000012595 I 0.793
YY1 Gallus gallus ENSGALG00000017388 I 0.793
YY1 Gorilla gorilla ENSGGOG00000026332 I 0.793
ENSGMOG00000010949 Gadus morhua ENSGMOG00000010949 I 0.793
ENSGMOG00000011803 Gadus morhua ENSGMOG00000011803 I 0.793
ENSLAFG00000032414 Loxodonta africana ENSLAFG00000032414 I 0.793
ENSLOCG00000011626 Lepisosteus oculatus ENSLOCG00000011626 I 0.793
ENSMGAG00000013304 Meleagris gallopavo ENSMGAG00000013304 I 0.793
YY1 Microcebus murinus ENSMICG00000006698 I 0.793
ENSMLUG00000024984 Myotis lucifugus ENSMLUG00000024984 I 0.793
YY2 Macaca mulatta ENSMMUG00000029197 I 0.793
ENSMODG00000013124 Monodelphis domestica ENSMODG00000013124 I 0.793
ENSMPUG00000002931 Mustela putorius furo ENSMPUG00000002931 I 0.793
Yy1 Mus musculus ENSMUSG00000021264 D 0.793
ENSNLEG00000000999 Nomascus leucogenys ENSNLEG00000000999 I 0.793
ENSOANG00000005723 Ornithorhynchus anatinus ENSOANG00000005723 I 0.793
ENSOCUG00000026938 Oryctolagus cuniculus ENSOCUG00000026938 I 0.793
ENSOGAG00000006955 Otolemur garnettii ENSOGAG00000006955 I 0.793
ENSONIG00000000896 Oreochromis niloticus ENSONIG00000000896 I 0.793
ENSONIG00000020108 Oreochromis niloticus ENSONIG00000020108 I 0.793
YY2 Oryzias latipes ENSORLG00000009449 I 0.793
yy1a Oryzias latipes ENSORLG00000015640 I 0.793
ENSPANG00000009274 Papio anubis ENSPANG00000009274 I 0.793
ENSPFOG00000002300 Poecilia formosa ENSPFOG00000002300 I 0.793
ENSPFOG00000007704 Poecilia formosa ENSPFOG00000007704 I 0.793
ENSPMAG00000006025 Petromyzon marinus ENSPMAG00000006025 I 0.793
ENSPPYG00000025949 Pongo abelii ENSPPYG00000025949 I 0.793
ENSPSIG00000016003 Pelodiscus sinensis ENSPSIG00000016003 I 0.793
YY1 Pan troglodytes ENSPTRG00000006717 I 0.793
Yy1 Rattus norvegicus ENSRNOG00000004339 I 0.793
ENSSHAG00000014750 Sarcophilus harrisii ENSSHAG00000014750 I 0.793
ENSTGUG00000012753 Taeniopygia guttata ENSTGUG00000012753 I 0.793
YY2 Tetraodon nigroviridis ENSTNIG00000010738 I 0.793
yy1a Tetraodon nigroviridis ENSTNIG00000017334 I 0.793
YY2 Takifugu rubripes ENSTRUG00000010532 I 0.793
yy1a Takifugu rubripes ENSTRUG00000012579 I 0.793
ENSXMAG00000008440 Xiphophorus maculatus ENSXMAG00000008440 I 0.793
ENSXMAG00000013413 Xiphophorus maculatus ENSXMAG00000013413 I 0.793
GB49343 Apis mellifera GB49343 I 0.793
HMEL010415 Heliconius melpomene HMEL010415 I 0.793
KGM_02499 Danaus plexippus KGM_02499 I 0.793
L798_03352 Zootermopsis nevadensis L798_03352 I 0.793
NEMVEDRAFT_v1g118750 Nematostella vectensis NEMVEDRAFT_v1g118750 I 0.793
NV10061 Nasonia vitripennis NV10061 I 0.793
RPRC009167 Rhodnius prolixus RPRC009167 I 0.793
SINV16765 Solenopsis invicta SINV16765 I 0.793
SMAR005684 Strigamia maritima SMAR005684 I 0.793
SPU_010295 Strongylocentrotus purpuratus SPU_010295 I 0.793
TC015577 Tribolium castaneum TC015577 I 0.793
tetur09g00130 Tetranychus urticae tetur09g00130 I 0.793
tetur09g00290 Tetranychus urticae tetur09g00290 I 0.793
YQE_09404 Dendroctonus ponderosae YQE_09404 I 0.793
Aan_R011513 Calypte anna Aan_R011513 I 0.793
Afo_R004638 Aptenodytes forsteri Afo_R004638 I 0.793
Alligator_sinensis_CCG004251.1 Alligator sinensis Alligator_sinensis_CCG004251.1 I 0.793
Brh_R004031 Buceros rhinoceros Brh_R004031 I 0.793
Cflo_10375--XP_392196.2_APIME Camponotus floridanus Cflo_10375--XP_392196.2_APIME I 0.793
Cflo_15890--XP_392196.2_APIME Camponotus floridanus Cflo_15890--XP_392196.2_APIME I 0.793
Gfo_R006742 Geospiza fortis Gfo_R006742 I 0.793
Myotis_brandtii_YY1_10025332 Myotis brandtii Myotis_brandtii_YY1_10025332 I 0.793
Pvit_14266 Pogona vitticeps Pvit_14266 I 0.793
Tal_R000269 Tyto alba Tal_R000269 I 0.793
yakG036002 Bos grunniens yakG036002 I 0.793
e_gw.8.110.1 Branchiostoma floridae e_gw.8.110.1 I 0.793
gw.8.511.1 Branchiostoma floridae gw.8.511.1 I 0.793
Sakowv30026333m.g Saccoglossus kowalevskii Sakowv30026333m.g I 0.793
CLEC004566 Cimex lectularius CLEC004566 I 0.793
HHAL002529-PA Halyomorpha halys HHAL002529-PA I 0.793
yy1.L Xenopus laevis XB-GENE-6254435 I 0.793
yy1 Xenopus tropicalis XB-GENE-961263 I 0.793
yy1.S Xenopus laevis XB-GENE-961267 I 0.793
AALB001578 Anopheles albimanus AALB001578 I 0.793
AFUN003297 Anopheles funestus AFUN003297 I 0.793
AMEC007067 Anopheles melas AMEC007067 I 0.793
ASIS015128 Anopheles sinensis ASIS015128 I 0.793
LLOJ009958 Lutzomyia longipalpis LLOJ009958 I 0.793
PPAI004379 Phlebotomus papatasi PPAI004379 I 0.793
YY2 Tupaia belangeri ENSTBEG00000011527 I 0.791
ACYPI007734 Acyrthosiphon pisum ACYPI007734 I 0.790
YY2 Monodelphis domestica ENSMODG00000028019 I 0.790
ENSSHAG00000010068 Sarcophilus harrisii ENSSHAG00000010068 I 0.790
ENSSSCG00000030818 Sus scrofa ENSSSCG00000030818 I 0.790
ENSSSCG00000030865 Sus scrofa ENSSSCG00000030865 I 0.790
PHUM284920 Pediculus humanus PHUM284920 I 0.790
Cmyd_10012120 Chelonia mydas Cmyd_10012120 I 0.790
LCUP013338 Lucilia cuprina LCUP013338 I 0.790
ECANG7_03870 Echinococcus canadensis ECANG7_03870 I 0.790
EmuJ_000476600 Echinococcus multilocularis EmuJ_000476600 I 0.790
TASK_0000670101 Taenia asiatica TASK_0000670101 I 0.790
TsM_000985500 Taenia solium TsM_000985500 I 0.790
TTAC_0000757501 Hydatigera taeniaeformis TTAC_0000757501 I 0.790
Ogr05382 Ophisaurus gracilis Ogr05382 I 0.788
Mbtps2 Mus musculus ENSMUSG00000046873 I 0.785
Yy2 Mus musculus ENSMUSG00000091736 I 0.785
TYY2_RAT Rattus norvegicus TYY2_RAT D 0.785
ENSDORG00000009642 Dipodomys ordii ENSDORG00000009642 I 0.781
ENSAMEG00000016465 Ailuropoda melanoleuca ENSAMEG00000016465 I 0.778
pho Drosophila melanogaster FBgn0002521 D 0.778
pho Drosophila simulans FBgn0067492 I 0.778
GG16416 Drosophila erecta FBgn0108648 I 0.778
GH23956 Drosophila grimshawi FBgn0131413 I 0.778
GM13006 Drosophila sechellia FBgn0167937 I 0.778
GJ12430 Drosophila virilis FBgn0199672 I 0.778
GK13655 Drosophila willistoni FBgn0215663 I 0.778
GE14485 Drosophila yakuba FBgn0232089 I 0.778
MCOS_0000134601 Mesocestoides corti MCOS_0000134601 I 0.778
YY2 Equus caballus ENSECAG00000014804 I 0.768
phol Drosophila melanogaster FBgn0035997 D 0.757
GA17456 Drosophila pseudoobscura FBgn0077467 I 0.757
GF24664 Drosophila ananassae FBgn0101657 I 0.757
GG14036 Drosophila erecta FBgn0106298 I 0.757
GH16213 Drosophila grimshawi FBgn0123684 I 0.757
GI13359 Drosophila mojavensis FBgn0136116 I 0.757
GL17968 Drosophila persimilis FBgn0155571 I 0.757
GM24870 Drosophila sechellia FBgn0179732 I 0.757
GD12921 Drosophila simulans FBgn0184646 I 0.757
GJ13188 Drosophila virilis FBgn0200414 I 0.757
GK20506 Drosophila willistoni FBgn0222503 I 0.757
GE21239 Drosophila yakuba FBgn0238511 I 0.757