CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0002260201
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0002260201
T156977_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0002260201-mRNA-1
C2H2 ZF
100
122
YRCRECDKEFRILRYLEKHRRIH
SROB_0002260201-mRNA-1
C2H2 ZF
128
150
YQCCYCGRQFNDWPNMNRHKRIH
SROB_0002260201-mRNA-1
C2H2 ZF
156
178
YRCTVCTKTFSQPAVYNEHVKRH
SROB_0002260201-mRNA-1
C2H2 ZF
184
206
YICTVCAKGFPRAARLAVHMRVH
SROB_0002260201-mRNA-1
C2H2 ZF
212
234
YPCTSCDRRFSQPHHLAAHLRVH
SROB_0002260201-mRNA-1
C2H2 ZF
240
263
YSCPKCDVSFACISNLRRHRKQVH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_143320
Schistosoma mansoni
Smp_143320
N
0.827
Sjc_0059340
Schistosoma japonicum
Sjc_0059340
N
0.827
csin106966
Clonorchis sinensis
csin106966
N
0.816