CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SSLN_0000326401
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0000326401
T157043_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0000326401-mRNA-1
C2H2 ZF
436
460
HVCPFGACAKAYSKSSHLKAHMRVH
SSLN_0000326401-mRNA-1
C2H2 ZF
466
490
FPCDWVGCNWRFARSDELTRHYRKH
SSLN_0000326401-mRNA-1
C2H2 ZF
496
518
FQCRVCQRAFARSDHLTLHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0000415601
Spirometra erinaceieuropaei
SPER_0000415601
N
0.823
PXEA_0000808001
Protopolystoma xenopodis
PXEA_0000808001
N
0.807
Smp_018170
Schistosoma mansoni
Smp_018170
I
0.803
Sjc_0075320
Schistosoma japonicum
Sjc_0075320
I
0.803
csin107779
Clonorchis sinensis
csin107779
I
0.803
SCUD_0001319701
Schistosoma curassoni
SCUD_0001319701
I
0.803
SMRZ_0002428501
Schistosoma margrebowiei
SMRZ_0002428501
I
0.803
SMTD_0001143301
Schistosoma mattheei
SMTD_0001143301
I
0.803
SROB_0001285401
Schistosoma rodhaini
SROB_0001285401
I
0.803
T265_11442
Opisthorchis viverrini
T265_11442
I
0.803
TRE_0000459601
Trichobilharzia regenti
TRE_0000459601
I
0.803
ECANG7_02206
Echinococcus canadensis
ECANG7_02206
N
0.788
EmuJ_000425100
Echinococcus multilocularis
EmuJ_000425100
N
0.788
HDID_0000765101
Hymenolepis diminuta
HDID_0000765101
N
0.788
HmN_000820000
Hymenolepis microstoma
HmN_000820000
N
0.788
HNAJ_0000435901
Hymenolepis nana
HNAJ_0000435901
N
0.788
TsM_000587400
Taenia solium
TsM_000587400
N
0.788
TTAC_0001070001
Hydatigera taeniaeformis
TTAC_0001070001
N
0.788
MCOS_0000678201
Mesocestoides corti
MCOS_0000678201
N
0.784
klf2b
Tetraodon nigroviridis
ENSTNIG00000014898
I
0.767
klf2b
Takifugu rubripes
ENSTRUG00000010065
I
0.767
SMU15026765
Schmidtea mediterranea
SMU15026765
I
0.765
ENSGALG00000000177
Gallus gallus
ENSGALG00000000177
I
0.764
ENSMGAG00000017068
Meleagris gallopavo
ENSMGAG00000017068
I
0.764
fgenesh2_pg.scaffold_114000041
Branchiostoma floridae
fgenesh2_pg.scaffold_114000041
I
0.764
D915_04370
Fasciola hepatica
D915_04370
I
0.760
L798_11558
Zootermopsis nevadensis
L798_11558
I
0.758
LotgiG179180
Lottia gigantea
LotgiG179180
I
0.758
BGLB008696
Biomphalaria glabrata
BGLB008696
I
0.758