CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1713000
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_1713000
T157432_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.756
0.798
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.756
0.798
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.756
0.798
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1713000.1
C2H2 ZF
640
662
YECKECKKTFGQLSNLKVHFRTH
SVE_1713000.1
C2H2 ZF
668
690
FTCHICTKAFTQLAHLQKHLLVH
SVE_1713000.1
C2H2 ZF
696
718
HQCHVCEKRFSSTSNLKTHLRLH
SVE_1713000.1
C2H2 ZF
724
746
YRCDLCEAKFTQHVHLKLHKRLH
SVE_1713000.1
C2H2 ZF
752
773
FKCKICSKAYISPSGLRTHWKT
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0000884500
Strongyloides papillosus
SPAL_0000884500
I
0.827
SSTP_0000757300
Strongyloides stercoralis
SSTP_0000757300
I
0.827
TCLT_0000472801
Thelazia callipaeda
TCLT_0000472801
I
0.772
TCNE_0001220201
Toxocara canis
TCNE_0001220201
I
0.772
ASU_05469
Ascaris suum
ASU_05469
I
0.770
DME_0000608401
Dracunculus medinensis
DME_0000608401
I
0.769
WUBG_04696
Wuchereria bancrofti
WUBG_04696
I
0.762
Bm3574
Brugia malayi
Bm3574
I
0.762
LOAG_11444
Loa loa
LOAG_11444
I
0.762
WBGene00238199
Onchocerca volvulus
WBGene00238199
I
0.762
BTMF_0000836601
Brugia timori
BTMF_0000836601
I
0.762
EVEC_0000549701
Enterobius vermicularis
EVEC_0000549701
I
0.762
nDi.2.2.2.g10740
Dirofilaria immitis
nDi.2.2.2.g10740
I
0.762
nOo.2.0.1.g07043
Onchocerca ochengi
nOo.2.0.1.g07043
I
0.762
SMUV_0001104401
Syphacia muris
SMUV_0001104401
I
0.762
BXY_0993100
Bursaphelenchus xylophilus
BXY_0993100
I
0.761
L596_g21750
Steinernema carpocapsae
L596_g21750
I
0.761
L889_g7623
Steinernema feltiae
L889_g7623
I
0.761
L892_g2443
Steinernema scapterisci
L892_g2443
I
0.761
L893_g23908
Steinernema glaseri
L893_g23908
I
0.761
L898_g18820
Steinernema monticolum
L898_g18820
I
0.761
nLs.2.1.2.g09168
Litomosoides sigmodontis
nLs.2.1.2.g09168
I
0.760
ACEP26221
Atta cephalotes
ACEP26221
I
0.757
DAPPUDRAFT_319330
Daphnia pulex
DAPPUDRAFT_319330
I
0.757
GB51060
Apis mellifera
GB51060
I
0.757
L798_14234
Zootermopsis nevadensis
L798_14234
I
0.757
PHUM607020
Pediculus humanus
PHUM607020
I
0.757
RPRC001983
Rhodnius prolixus
RPRC001983
I
0.757
SINV14078
Solenopsis invicta
SINV14078
I
0.757
SMAR011793
Strigamia maritima
SMAR011793
I
0.757
Cflo_04377--XP_391847.3_APIME
Camponotus floridanus
Cflo_04377--XP_391847.3_APIME
I
0.757
CLEC009125
Cimex lectularius
CLEC009125
I
0.757
HHAL002221-PA
Halyomorpha halys
HHAL002221-PA
I
0.757
CpipJ_CPIJ007425
Culex pipiens
CpipJ_CPIJ007425
I
0.756
AAEL004255
Aedes aegypti
AAEL004255
I
0.756
AAEL013770
Aedes aegypti
AAEL013770
I
0.756
ADAC005262
Anopheles darlingi
ADAC005262
I
0.756
AGAP006592
Anopheles gambiae
AGAP006592
I
0.756
BGIBMGA000319
Bombyx mori
BGIBMGA000319
I
0.756
CPIJ007425
Culex quinquefasciatus
CPIJ007425
I
0.756
Blimp-1
Drosophila melanogaster
FBgn0035625
D
0.756
GF23985
Drosophila ananassae
FBgn0100979
I
0.756
GG15278
Drosophila erecta
FBgn0107530
I
0.756
GH16462
Drosophila grimshawi
FBgn0123933
I
0.756
GM14713
Drosophila sechellia
FBgn0169634
I
0.756
GJ13412
Drosophila virilis
FBgn0200637
I
0.756
GK17303
Drosophila willistoni
FBgn0219302
I
0.756
GE21501
Drosophila yakuba
FBgn0238758
I
0.756
GA23469
Drosophila pseudoobscura
FBgn0244871
I
0.756
HMEL007072
Heliconius melpomene
HMEL007072
I
0.756
KGM_16647
Danaus plexippus
KGM_16647
I
0.756
MCINX009345
Melitaea cinxia
MCINX009345
I
0.756
LCUP008191
Lucilia cuprina
LCUP008191
I
0.756
AATE010559
Anopheles atroparvus
AATE010559
I
0.756
ACOM039487
Anopheles coluzzii
ACOM039487
I
0.756
ACUA020082
Anopheles culicifacies
ACUA020082
I
0.756
AFAF006673
Anopheles farauti
AFAF006673
I
0.756
AFUN002606
Anopheles funestus
AFUN002606
I
0.756
AMEC005588
Anopheles melas
AMEC005588
I
0.756
AMEM000073
Anopheles merus
AMEM000073
I
0.756
ASIS005657
Anopheles sinensis
ASIS005657
I
0.756
MDOA000384
Musca domestica
MDOA000384
I
0.756
PPAI008567
Phlebotomus papatasi
PPAI008567
I
0.756