CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000346201
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000346201
T157967_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000346201-mRNA-1
C2H2 ZF
1396
1418
YECVHCYERFSDKRIWRAHMDKH
TRE_0000346201-mRNA-1
C2H2 ZF
1424
1447
HRCMECGRAFRLRPSLLHHMRCHH
TRE_0000346201-mRNA-1
C2H2 ZF
1455
1477
TCEFCGLIYPKQSSLRYHIFRMH
TRE_0000346201-mRNA-1
C2H2 ZF
1483
1506
HECFMCQRRFRLETELRRHVKEMH
TRE_0000346201-mRNA-1
C2H2 ZF
1538
1561
YQCTDCQTTFKSKLAMKRHIRVEH
TRE_0000346201-mRNA-1
C2H2 ZF
1593
1615
FECEYCNKKFTKTAYYNEHLRIH
TRE_0000346201-mRNA-1
C2H2 ZF
1621
1643
FECHICRKRFNKKSNLNVHVKFH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sjc_0065330
Schistosoma japonicum
Sjc_0065330
N
0.776