CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000553001
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000553001
T157978_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000553001-mRNA-1
C2H2 ZF
122
144
HHCTDCSKSFYRASDLVKHRRTH
TRE_0000553001-mRNA-1
C2H2 ZF
150
172
FACLQCGRAFADSSSLSAHKRIH
TRE_0000553001-mRNA-1
C2H2 ZF
178
200
YHCCECGKNFSVSSSLVKHRRIH
TRE_0000553001-mRNA-1
C2H2 ZF
206
227
YRCEFCGRAFSDNSSYSAHKKR
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_033110
Schistosoma mansoni
Smp_033110
N
0.822
A_07028
Schistosoma haematobium
A_07028
N
0.822
SMRZ_0000456601
Schistosoma margrebowiei
SMRZ_0000456601
N
0.822
SMTD_0001305901
Schistosoma mattheei
SMTD_0001305901
N
0.822
SROB_0000156801
Schistosoma rodhaini
SROB_0000156801
N
0.822