CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000922201
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000922201
T157997_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000922201-mRNA-1
C2H2 ZF
213
237
YQCTFPGCSKAYYKRSHLNEHFHLH
TRE_0000922201-mRNA-1
C2H2 ZF
243
267
HLCNQPGCGARFTRADQLSRHRRAH
TRE_0000922201-mRNA-1
C2H2 ZF
273
294
FFCHICSKRFKRSDHLKVHLAR
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
T265_00397
Opisthorchis viverrini
T265_00397
N
0.809
csin106566
Clonorchis sinensis
csin106566
N
0.806
D915_00576
Fasciola hepatica
D915_00576
N
0.781
ECPE_0000288901
Echinostoma caproni
ECPE_0000288901
N
0.781
Smp_172480
Schistosoma mansoni
Smp_172480
N
0.777
SCUD_0000946401
Schistosoma curassoni
SCUD_0000946401
N
0.777
SMRZ_0000333601
Schistosoma margrebowiei
SMRZ_0000333601
N
0.777
SMTD_0000528101
Schistosoma mattheei
SMTD_0000528101
N
0.777
SROB_0000403501
Schistosoma rodhaini
SROB_0000403501
N
0.777
PXEA_0003453401
Protopolystoma xenopodis
PXEA_0003453401
N
0.758