CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10022679
(
Crassostrea gigas
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
CGI_10022679
T158871_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC38088
C2HC ZF
5
33
NCPYPGCDGSGHVTGNYSSHRSLSGCPMA
EKC38088
C2HC ZF
46
74
KCPTPGCDGSGHVTGNYASHRSLSGCPRA
EKC38088
C2HC ZF
93
121
RCPIPGCDGTGHVTGKYLSHRSASGCPLA
EKC38088
C2HC ZF
151
179
VCPTPGCDGSGHSNGSFLSHRSLSGCPRA
Links
Other
C2HC ZF
family TFs
Other
Crassostrea gigas
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPMAG00000001124
Petromyzon marinus
ENSPMAG00000001124
N
0.879
MYT1L
Pteropus vampyrus
ENSPVAG00000001625
N
0.853
tetur15g00740
Tetranychus urticae
tetur15g00740
N
0.836
CapteG179381
Capitella teleta
CapteG179381
N
0.810
ENSAMEG00000015014
Ailuropoda melanoleuca
ENSAMEG00000015014
I
0.802
MYT1L
Tetraodon nigroviridis
ENSTNIG00000008296
N
0.793
ENSAMXG00000004259
Astyanax mexicanus
ENSAMXG00000004259
N
0.776
MYT1L
Echinops telfairi
ENSETEG00000015771
N
0.776
LDEC007508
Leptinotarsa decemlineata
LDEC007508
N
0.767
ENSMEUG00000001386
Macropus eugenii
ENSMEUG00000001386
N
0.765
ENSGMOG00000000679
Gadus morhua
ENSGMOG00000000679
N
0.759
MCINX013435
Melitaea cinxia
MCINX013435
N
0.759
ST18
Callithrix jacchus
ENSCJAG00000014630
N
0.750
Alligator_sinensis_CCG007256.1
Alligator sinensis
Alligator_sinensis_CCG007256.1
N
0.750
AGAP000875
Anopheles gambiae
AGAP000875
N
0.741
AARA002561
Anopheles arabiensis
AARA002561
N
0.741
ACUA023712
Anopheles culicifacies
ACUA023712
N
0.741
ADIR004650
Anopheles dirus
ADIR004650
N
0.741
AFUN000252
Anopheles funestus
AFUN000252
N
0.741
AMEC011182
Anopheles melas
AMEC011182
N
0.741
AMIN005800
Anopheles minimus
AMIN005800
N
0.741
AQUA002448
Anopheles quadriannulatus
AQUA002448
N
0.741
ASIS023610
Anopheles sinensis
ASIS023610
N
0.741
AAEL001230
Aedes aegypti
AAEL001230
N
0.733
Myt1l
Rattus norvegicus
ENSRNOG00000004269
N
0.724
NEMVEDRAFT_v1g242817
Nematostella vectensis
NEMVEDRAFT_v1g242817
N
0.724
ci-mytf
Ciona intestinalis
ENSCING00000007794
N
0.716
D917_04267
Trichinella nativa
D917_04267
N
0.702