CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g46521
(
Romanomermis culicivorax
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
nRc.2.0.1.g46521
T159663_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t46521-RA
C2HC ZF
273
300
KCPTPGCDGTGHTTGLYAFHRSISGCPR
nRc.2.0.1.t46521-RA
C2HC ZF
318
346
RCPTRGCTGKGHVNSNRTTHRSLSGCPIA
nRc.2.0.1.t46521-RA
C2HC ZF
591
619
KCPIVGCDGSGHISGKYLSHRSVSGCPLA
Links
Other
C2HC ZF
family TFs
Other
Romanomermis culicivorax
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ogr11018
Ophisaurus gracilis
Ogr11018
N
0.779
ENSPMAG00000002519
Petromyzon marinus
ENSPMAG00000002519
N
0.769
EFV52052
Trichinella spiralis
EFV52052
N
0.767
ENSXMAG00000007322
Xiphophorus maculatus
ENSXMAG00000007322
N
0.753
DAPPUDRAFT_241731
Daphnia pulex
DAPPUDRAFT_241731
N
0.733
Cmyd_10017545
Chelonia mydas
Cmyd_10017545
N
0.733
AEPI011200
Anopheles epiroticus
AEPI011200
N
0.721
ST18
Sorex araneus
ENSSARG00000014015
N
0.709