CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_18-snap-gene-0.65
(
Pythium irregulare
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
maker-pir_contig_18-snap-gene-0.65
T160126_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.750
0.750
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000013753
CBF/NF-Y
70
125
APVYVNAKQYHRILIRRQQRAKLEAKLGNIRQRKAYLHDSRHKHAMRRPRGPGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Pythium irregulare
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-piw_contig_15-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_15-fgenesh-gene-0.1
I
0.982
PYU1_G008699
Pythium ultimum
PYU1_G008699
I
0.982
F443_09912
Phytophthora parasitica
F443_09912
I
0.946
fgenesh_scip_prom.46568.6573
Phytophthora kernoviae
fgenesh_scip_prom.46568.6573
I
0.946
HpaG800403
Hyaloperonospora arabidopsidis
HpaG800403
I
0.946
maker-piw_contig_1928-snap-gene-0.5
Pythium iwayamai
maker-piw_contig_1928-snap-gene-0.5
I
0.946
Phyra79846
Phytophthora ramorum
Phyra79846
I
0.946
Physo129160
Phytophthora sojae
Physo129160
I
0.946
fgenesh1_pm.C_scaffold_9000162
Phytophthora capsici
fgenesh1_pm.C_scaffold_9000162
I
0.946
F443_09866
Phytophthora parasitica
F443_09866
I
0.929
maker-pve_contig_264-snap-gene-0.28
Pythium vexans
maker-pve_contig_264-snap-gene-0.28
I
0.929
PITG_17070
Phytophthora infestans
PITG_17070
I
0.929
PITG_17109
Phytophthora infestans
PITG_17109
I
0.929
PYU1_G008666
Pythium ultimum
PYU1_G008666
I
0.929
snap_masked-pir_contig_257-abinit-gene-0.35
Pythium irregulare
snap_masked-pir_contig_257-abinit-gene-0.35
I
0.929
maker-pve_contig_438-snap-gene-0.17
Pythium vexans
maker-pve_contig_438-snap-gene-0.17
I
0.911
estExt_fgenesh1_kg.C_470026
Phytophthora capsici
estExt_fgenesh1_kg.C_470026
I
0.911
fgenesh_scip_prom.46568.5086
Phytophthora kernoviae
fgenesh_scip_prom.46568.5086
I
0.893
maker-pag1_scaffold_20-fgenesh-gene-0.2
Pythium aphanidermatum
maker-pag1_scaffold_20-fgenesh-gene-0.2
I
0.893
maker-par_contig_163-fgenesh-gene-0.7
Pythium arrhenomanes
maker-par_contig_163-fgenesh-gene-0.7
I
0.893
Phyra79817
Phytophthora ramorum
Phyra79817
I
0.893
AMAG_13560
Allomyces macrogynus
AMAG_13560
I
0.768
AMAG_13812
Allomyces macrogynus
AMAG_13812
I
0.768
GLOINDRAFT_349601
Rhizophagus irregularis
GLOINDRAFT_349601
I
0.768
CLUG_05888
Candida lusitaniae
CLUG_05888
I
0.750
CPAG_01070
Candida parapsilosis
CPAG_01070
I
0.750
CANTEDRAFT_116468
Candida tenuis
CANTEDRAFT_116468
I
0.750
CaO19.1228
Candida albicans
CaO19.1228
I
0.750
CaO19.8814
Candida albicans
CaO19.8814
I
0.750
CD36_07150
Candida dubliniensis
CD36_07150
I
0.750
CLUG_05888
Clavispora lusitaniae
CLUG_05888
I
0.750
CORT_0A07580
Candida orthopsilosis
CORT_0A07580
I
0.750
CTRG_03974
Candida tropicalis
CTRG_03974
I
0.750
DEHA2F26488g
Debaryomyces hansenii
DEHA2F26488g
I
0.750
G210_4220
Candida maltosa
G210_4220
I
0.750
GNLVRS01_PISO0M07338g
Millerozyma farinosa
GNLVRS01_PISO0M07338g
I
0.750
GNLVRS01_PISO0N07471g
Millerozyma farinosa
GNLVRS01_PISO0N07471g
I
0.750
HPODL_04703
Ogataea parapolymorpha
HPODL_04703
I
0.750
JL09_g3820
Pichia kudriavzevii
JL09_g3820
I
0.750
JL09_g5559
Pichia kudriavzevii
JL09_g5559
I
0.750
KUCA_T00003294001
Kuraishia capsulata
KUCA_T00003294001
I
0.750
PICST_61386
Scheffersomyces stipitis
PICST_61386
I
0.750
SPAPADRAFT_48205
Spathaspora passalidarum
SPAPADRAFT_48205
I
0.750
SU7_1051
Saccharomyces arboricola
SU7_1051
I
0.750
YALI0_F23111g
Yarrowia lipolytica
YALI0_F23111g
I
0.750
HAP2
Saccharomyces cerevisiae
YGL237C
D
0.750
e_gww1.6.1.1022.1
Pichia stipitis
e_gww1.6.1.1022.1
I
0.750
6941_YGL237C
Saccharomyces mikatae
6941_YGL237C
I
0.750
7676_YGL237C
Saccharomyces paradoxus
7676_YGL237C
I
0.750
7831_YGL237C
Saccharomyces bayanus
7831_YGL237C
I
0.750
RO3G_00980
Rhizopus oryzae
RO3G_00980
I
0.732
RO3G_16178
Rhizopus oryzae
RO3G_16178
I
0.732
AWRI1499_3546
Brettanomyces bruxellensis
AWRI1499_3546
I
0.732
BN7_6362
Wickerhamomyces ciferrii
BN7_6362
I
0.732
BOTBODRAFT_182611
Botryobasidium botryosum
BOTBODRAFT_182611
I
0.732
FIBRA_08626
Fibroporia radiculosa
FIBRA_08626
I
0.732
FOMPIDRAFT_1123646
Fomitopsis pinicola
FOMPIDRAFT_1123646
I
0.732
HETIRDRAFT_248206
Heterobasidion irregulare
HETIRDRAFT_248206
I
0.732
KLTH0G00880g
Lachancea thermotolerans
KLTH0G00880g
I
0.732
Kpol_507p12
Vanderwaltozyma polyspora
Kpol_507p12
I
0.732
LELG_00868
Lodderomyces elongisporus
LELG_00868
I
0.732
M378DRAFT_52467
Amanita muscaria
M378DRAFT_52467
I
0.732
M404DRAFT_68462
Pisolithus tinctorius
M404DRAFT_68462
I
0.732
M407DRAFT_54328
Tulasnella calospora
M407DRAFT_54328
I
0.732
Moror_8992
Moniliophthora roreri
Moror_8992
I
0.732
PAS_chr3_0766
Komagataella pastoris
PAS_chr3_0766
I
0.732
PAXRUDRAFT_147875
Paxillus rubicundulus
PAXRUDRAFT_147875
I
0.732
PHACADRAFT_54766
Phanerochaete carnosa
PHACADRAFT_54766
I
0.732
PHLGIDRAFT_43379
Phlebiopsis gigantea
PHLGIDRAFT_43379
I
0.732
PILCRDRAFT_824094
Piloderma croceum
PILCRDRAFT_824094
I
0.732
PISMIDRAFT_40699
Pisolithus microcarpus
PISMIDRAFT_40699
I
0.732
PLEOSDRAFT_1027012
Pleurotus ostreatus
PLEOSDRAFT_1027012
I
0.732
RHTO_00634
Rhodosporidium toruloides
RHTO_00634
I
0.732
RTG_01693
Rhodotorula glutinis
RTG_01693
I
0.732
SCLCIDRAFT_62922
Scleroderma citrinum
SCLCIDRAFT_62922
I
0.732
SERLA73DRAFT_72938
Serpula lacrymans
SERLA73DRAFT_72938
I
0.732
SKUD_123802
Saccharomyces kudriavzevii
SKUD_123802
I
0.732
ZBAI_03607
Zygosaccharomyces bailii
ZBAI_03607
I
0.732
ZBAI_09292
Zygosaccharomyces bailii
ZBAI_09292
I
0.732
estExt_fgenesh1_pg.C_120063
Sporobolomyces roseus
estExt_fgenesh1_pg.C_120063
I
0.732
fgeneshMC_pg.10_#_374
Mucor circinelloides
fgeneshMC_pg.10_#_374
I
0.732
fgeneshMC_pg.11_#_166
Mucor circinelloides
fgeneshMC_pg.11_#_166
I
0.732
gwh2.6.574.1
Phanerochaete chrysosporium
gwh2.6.574.1
I
0.732
KLTH0G00880g
Kluyveromyces thermotolerans
KLTH0G00880g
I
0.732
Kwal_19244
Kluyveromyces waltii
Kwal_19244
I
0.732
XP_002492996.1
Pichia pastoris
XP_002492996.1
I
0.732
MDP0000183865
Malus domestica
MDP0000183865
I
0.727
SNOG_15220
Stagonospora nodorum
SNOG_15220
I
0.714
AACERI_AaceriAFR257W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR257W
I
0.714
AGOS_AFR257W
Ashbya gossypii
AGOS_AFR257W
I
0.714
HAP2C
Arabidopsis thaliana
AT1G72830
N
0.714
BN946_scf184796.g4
Trametes cinnabarina
BN946_scf184796.g4
I
0.714
CAGL0H07843g
Candida glabrata
CAGL0H07843g
I
0.714
CC1G_07415
Coprinopsis cinerea
CC1G_07415
I
0.714
COCC4DRAFT_21556
Bipolaris maydis
COCC4DRAFT_21556
I
0.714
COCCADRAFT_25556
Bipolaris zeicola
COCCADRAFT_25556
I
0.714
COCMIDRAFT_31784
Bipolaris oryzae
COCMIDRAFT_31784
I
0.714
COCSADRAFT_336507
Bipolaris sorokiniana
COCSADRAFT_336507
I
0.714
COCVIDRAFT_13139
Bipolaris victoriae
COCVIDRAFT_13139
I
0.714
CY34DRAFT_54046
Suillus luteus
CY34DRAFT_54046
I
0.714
Ecym_2589
Eremothecium cymbalariae
Ecym_2589
I
0.714
ENSCING00000013482
Ciona intestinalis
ENSCING00000013482
I
0.714
ENSCSAVG00000007408
Ciona savignyi
ENSCSAVG00000007408
I
0.714
nfyal
Danio rerio
ENSDARG00000001621
I
0.714
HAP2C
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001597
N
0.714
GALMADRAFT_123329
Galerina marginata
GALMADRAFT_123329
I
0.714
GLOTRDRAFT_21409
Gloeophyllum trabeum
GLOTRDRAFT_21409
I
0.714
GLYMA08G13090
Glycine max
GLYMA08G13090
N
0.714
GSTUM_00001625001
Tuber melanosporum
GSTUM_00001625001
I
0.714
JAAARDRAFT_97747
Jaapia argillacea
JAAARDRAFT_97747
I
0.714
K443DRAFT_676702
Laccaria amethystina
K443DRAFT_676702
I
0.714
KLLA0_A00891g
Kluyveromyces lactis
KLLA0_A00891g
I
0.714
KNAG_0I00270
Kazachstania naganishii
KNAG_0I00270
I
0.714
LALA0_S06e08218g
Lachancea lanzarotensis
LALA0_S06e08218g
I
0.714
LEMA_P028420.1
Leptosphaeria maculans
LEMA_P028420.1
I
0.714
M413DRAFT_24434
Hebeloma cylindrosporum
M413DRAFT_24434
I
0.714
POSPLDRAFT_42451
Postia placenta
POSPLDRAFT_42451
I
0.714
PTRG_08051
Pyrenophora triticirepentis
PTRG_08051
I
0.714
PTT_11232
Pyrenophora teres
PTT_11232
I
0.714
SCHCODRAFT_110229
Schizophyllum commune
SCHCODRAFT_110229
I
0.714
SETTUDRAFT_148331
Setosphaeria turcica
SETTUDRAFT_148331
I
0.714
SNOG_15220
Phaeosphaeria nodorum
SNOG_15220
I
0.714
php2
Schizosaccharomyces pombe
SPBC725.11c
I
0.714
tetur23g00370
Tetranychus urticae
tetur23g00370
I
0.714
TPHA_0A05980
Tetrapisispora phaffii
TPHA_0A05980
I
0.714
V565_064680
Rhizoctonia solani
V565_064680
I
0.714
W97_01249
Coniosporium apollinis
W97_01249
I
0.714
ZYRO0E09372g
Zygosaccharomyces rouxii
ZYRO0E09372g
I
0.714
estExt_fgenesh1_pm.C_30047
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_30047
I
0.714
estExt_fgeneshPB_pg.C_250119
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_250119
I
0.714
fgeneshPB_pg.4__282
Phycomyces blakesleeanus
fgeneshPB_pg.4__282
I
0.714
Sakowv30001860m.g
Saccoglossus kowalevskii
Sakowv30001860m.g
I
0.714
Eucgr.F03169
Eucalyptus grandis
Eucgr.F03169
I
0.714
AB03151.1
Alternaria brassicicola
AB03151.1
I
0.714
SAKL0F00990g
Lachancea kluyveri
SAKL0F00990g
I
0.714