CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NF-YA10
(
Arabidopsis lyrata
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
scaffold_600636.1
T160386_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_600636.1
CBF/NF-Y
134
186
GTIYVNSKQYHGIIRRRQSRAKAEKLSRCRKPYMHHSRHLHAMRRPRGSGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Arabidopsis lyrata
TFs
191 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NFYA10
Arabidopsis thaliana
AT5G06510
N
1.000
Bostr.13129s0320
Boechera stricta
Bostr.13129s0320
N
0.981
Cagra.2117s0012
Capsella grandiflora
Cagra.2117s0012
N
0.962
Carubv10001713m.g
Capsella rubella
Carubv10001713m.g
N
0.962
Thhalv10021244m.g
Eutrema salsugineum
Thhalv10021244m.g
N
0.962
UNE8
Arabidopsis thaliana
AT3G05690
N
0.943
Bo5g145140
Brassica oleracea
Bo5g145140
N
0.943
UNE8
Arabidopsis lyrata
fgenesh2_kg.3__563__AT3G05690.1
N
0.943
Bostr.2570s0105
Boechera stricta
Bostr.2570s0105
N
0.943
Thhalv10014346m.g
Eutrema salsugineum
Thhalv10014346m.g
N
0.943
Bo3g060160
Brassica oleracea
Bo3g060160
N
0.906
Cagra.2108s0005
Capsella grandiflora
Cagra.2108s0005
N
0.893
Carubv10014086m.g
Capsella rubella
Carubv10014086m.g
N
0.893
Bo9g176100
Brassica oleracea
Bo9g176100
N
0.887
Bra001164
Brassica rapa
Bra001164
N
0.887
Bra009200
Brassica rapa
Bra009200
N
0.868
VIT_08s0032g01190
Vitis vinifera
VIT_08s0032g01190
N
0.868
Cla017884
Citrullus lanatus
Cla017884
N
0.868
Cucsa.241980
Cucumis sativus
Cucsa.241980
N
0.868
Lus10013592.g
Linum usitatissimum
Lus10013592.g
N
0.868
Lus10021259.g
Linum usitatissimum
Lus10021259.g
N
0.868
Bo1g150420
Brassica oleracea
Bo1g150420
N
0.857
Bra040529
Brassica rapa
Bra040529
N
0.857
Ca_00866
Cicer arietinum
Ca_00866
N
0.849
Ciclev10012232m.g
Citrus clementina
Ciclev10012232m.g
N
0.849
evm.TU.supercontig_104.9
Carica papaya
evm.TU.supercontig_104.9
N
0.849
orange1.1g021081m.g
Citrus sinensis
orange1.1g021081m.g
N
0.849
GLYMA03G36140
Glycine max
GLYMA03G36140
N
0.830
POPTR_0006s21640
Populus trichocarpa
POPTR_0006s21640
N
0.830
Gorai.007G363800
Gossypium raimondii
Gorai.007G363800
N
0.830
PK26326.1
Cannabis sativa
PK26326.1
N
0.830
chr5.CM0571.20.nd
Lotus japonicus
chr5.CM0571.20.nd
N
0.830
PRUPE_ppa017366mg
Prunus persica
PRUPE_ppa017366mg
N
0.811
TCM_022984
Theobroma cacao
TCM_022984
N
0.811
Ca_14455
Cicer arietinum
Ca_14455
N
0.811
Pm026038
Prunus mume
Pm026038
N
0.811
gene18295-v1.0-hybrid
Fragaria vesca
gene18295-v1.0-hybrid
N
0.811
Gorai.002G234400
Gossypium raimondii
Gorai.002G234400
N
0.811
SapurV1A.1209s0040
Salix purpurea
SapurV1A.1209s0040
N
0.811
GLYMA19G38800
Glycine max
GLYMA19G38800
N
0.804
GLYMA02G35190
Glycine max
GLYMA02G35190
N
0.792
GSMUA_Achr7G07860_001
Musa acuminata
GSMUA_Achr7G07860_001
N
0.792
MTR_1g056530
Medicago truncatula
MTR_1g056530
N
0.792
POPTR_0016s06860
Populus trichocarpa
POPTR_0016s06860
N
0.792
29333.m001059
Ricinus communis
29333.m001059
N
0.792
MDP0000129029
Malus domestica
MDP0000129029
N
0.792
MDP0000588222
Malus domestica
MDP0000588222
N
0.792
MDP0000785523
Malus domestica
MDP0000785523
N
0.792
SapurV1A.0258s0010
Salix purpurea
SapurV1A.0258s0010
N
0.792
SapurV1A.0980s0030
Salix purpurea
SapurV1A.0980s0030
N
0.792
chr1.CM0361.430.nc
Lotus japonicus
chr1.CM0361.430.nc
N
0.792
GLYMA10G10240
Glycine max
GLYMA10G10240
N
0.774
cassava24247.valid.m1
Manihot esculenta
cassava24247.valid.m1
N
0.774
cassava41983.valid.m1
Manihot esculenta
cassava41983.valid.m1
N
0.774
MTR_7g106450
Medicago truncatula
MTR_7g106450
N
0.768
MDP0000375005
Malus domestica
MDP0000375005
N
0.768
MDP0000948645
Malus domestica
MDP0000948645
N
0.768
GRMZM5G857944
Zea mays
GRMZM5G857944
N
0.755
POPTR_0006s05210
Populus trichocarpa
POPTR_0006s05210
I
0.755
Si019645m.g
Setaria italica
Si019645m.g
N
0.755
TCM_024732
Theobroma cacao
TCM_024732
I
0.755
Cla015490
Citrullus lanatus
Cla015490
I
0.755
Cla017115
Citrullus lanatus
Cla017115
N
0.755
Pm027028
Prunus mume
Pm027028
N
0.755
29912.m005288
Ricinus communis
29912.m005288
N
0.755
cassava38260.valid.m1
Manihot esculenta
cassava38260.valid.m1
I
0.755
Cucsa.127910
Cucumis sativus
Cucsa.127910
I
0.755
mgf025421m
Mimulus guttatus
mgf025421m
N
0.755
Aquca_009_00676
Aquilegia coerulea
Aquca_009_00676
N
0.755
Eucgr.A02381
Eucalyptus grandis
Eucgr.A02381
N
0.755
Eucgr.A02570
Eucalyptus grandis
Eucgr.A02570
N
0.755
Eucgr.C00842
Eucalyptus grandis
Eucgr.C00842
N
0.755
Gorai.002G151800
Gossypium raimondii
Gorai.002G151800
I
0.755
Gorai.003G093300
Gossypium raimondii
Gorai.003G093300
I
0.755
PK21261.1
Cannabis sativa
PK21261.1
I
0.755
AMTR_s00103p00144230
Amborella trichopoda
AMTR_s00103p00144230
I
0.736
AMTR_s00155p00071520
Amborella trichopoda
AMTR_s00155p00071520
N
0.736
GLYMA09G07960
Glycine max
GLYMA09G07960
I
0.736
GLYMA12G36540
Glycine max
GLYMA12G36540
I
0.736
GLYMA15G18970
Glycine max
GLYMA15G18970
I
0.736
GLYMA17G05920
Glycine max
GLYMA17G05920
I
0.736
GSMUA_Achr4G11090_001
Musa acuminata
GSMUA_Achr4G11090_001
I
0.736
GSMUA_Achr4G31650_001
Musa acuminata
GSMUA_Achr4G31650_001
N
0.736
GSMUA_Achr7G01070_001
Musa acuminata
GSMUA_Achr7G01070_001
N
0.736
OB03G37700
Oryza brachyantha
OB03G37700
I
0.736
OMERI07G18960
Oryza meridionalis
OMERI07G18960
N
0.736
PGSC0003DMG400000272
Solanum tuberosum
PGSC0003DMG400000272
N
0.736
POPTR_0018s07220
Populus trichocarpa
POPTR_0018s07220
N
0.736
Sb04g034760
Sorghum bicolor
Sb04g034760
I
0.736
Solyc12g009050.1
Solanum lycopersicum
Solyc12g009050.1
N
0.736
VIT_08s0007g08250
Vitis vinifera
VIT_08s0007g08250
I
0.736
Ca_11593
Cicer arietinum
Ca_11593
N
0.736
Cucsa.374630
Cucumis sativus
Cucsa.374630
I
0.736
Aquca_026_00359
Aquilegia coerulea
Aquca_026_00359
N
0.736
Ciclev10005144m.g
Citrus clementina
Ciclev10005144m.g
I
0.736
evm.TU.supercontig_125.6
Carica papaya
evm.TU.supercontig_125.6
I
0.736
Gorai.004G066000
Gossypium raimondii
Gorai.004G066000
I
0.736
Lus10011326.g
Linum usitatissimum
Lus10011326.g
I
0.736
Lus10012202.g
Linum usitatissimum
Lus10012202.g
I
0.736
MDP0000223651
Malus domestica
MDP0000223651
N
0.736
MDP0000279028
Malus domestica
MDP0000279028
N
0.736
MDP0000506954
Malus domestica
MDP0000506954
N
0.736
MDP0000827821
Malus domestica
MDP0000827821
N
0.736
orange1.1g017825m.g
Citrus sinensis
orange1.1g017825m.g
I
0.736
Pavir.Aa00318
Panicum virgatum
Pavir.Aa00318
I
0.736
Pavir.J00945
Panicum virgatum
Pavir.J00945
I
0.736
PK20005.1
Cannabis sativa
PK20005.1
N
0.732
AMTR_s00004p00174960
Amborella trichopoda
AMTR_s00004p00174960
N
0.717
BGIOSGA013378
Oryza indica
BGIOSGA013378
I
0.717
BGIOSGA028138
Oryza indica
BGIOSGA028138
N
0.717
BRADI1G11800
Brachypodium distachyon
BRADI1G11800
I
0.717
F775_09086
Aegilops tauschii
F775_09086
N
0.717
GLYMA08G13090
Glycine max
GLYMA08G13090
N
0.717
GLYMA09G02770
Glycine max
GLYMA09G02770
N
0.717
GLYMA13G16770
Glycine max
GLYMA13G16770
N
0.717
GLYMA15G13660
Glycine max
GLYMA15G13660
N
0.717
GRMZM2G091964
Zea mays
GRMZM2G091964
I
0.717
GSMUA_Achr4G28390_001
Musa acuminata
GSMUA_Achr4G28390_001
N
0.717
LPERR02G28390
Leersia perrieri
LPERR02G28390
I
0.717
LPERR03G25340
Leersia perrieri
LPERR03G25340
I
0.717
LPERR08G05240
Leersia perrieri
LPERR08G05240
N
0.717
LPERR12G16030
Leersia perrieri
LPERR12G16030
N
0.717
OB02G41320
Oryza brachyantha
OB02G41320
I
0.717
OB12G25960
Oryza brachyantha
OB12G25960
N
0.717
OBART02G34510
Oryza barthii
OBART02G34510
I
0.717
OBART03G30600
Oryza barthii
OBART03G30600
I
0.717
OBART08G05580
Oryza barthii
OBART08G05580
N
0.717
OGLUM03G30810
Oryza glumaepatula
OGLUM03G30810
I
0.717
OGLUM08G05950
Oryza glumaepatula
OGLUM08G05950
N
0.717
OLONG_018144
Oryza longistaminata
OLONG_018144
N
0.717
OMERI02G32760
Oryza meridionalis
OMERI02G32760
I
0.717
OMERI03G26770
Oryza meridionalis
OMERI03G26770
I
0.717
OMERI08G05500
Oryza meridionalis
OMERI08G05500
N
0.717
OMERI12G13600
Oryza meridionalis
OMERI12G13600
N
0.717
ONIVA02G36550
Oryza nivara
ONIVA02G36550
I
0.717
ONIVA03G31950
Oryza nivara
ONIVA03G31950
I
0.717
ONIVA07G02150
Oryza nivara
ONIVA07G02150
N
0.717
ONIVA08G05590
Oryza nivara
ONIVA08G05590
N
0.717
OPUNC02G31840
Oryza punctata
OPUNC02G31840
I
0.717
OPUNC03G27900
Oryza punctata
OPUNC03G27900
I
0.717
ORGLA02G0298500
Oryza glaberrima
ORGLA02G0298500
I
0.717
ORGLA03G0280400
Oryza glaberrima
ORGLA03G0280400
I
0.717
ORGLA08G0048400
Oryza glaberrima
ORGLA08G0048400
N
0.717
ORUFI03G31840
Oryza rufipogon
ORUFI03G31840
I
0.717
ORUFI07G03340
Oryza rufipogon
ORUFI07G03340
N
0.717
ORUFI08G06250
Oryza rufipogon
ORUFI08G06250
N
0.717
OS02G0776400
Oryza sativa
OS02G0776400
I
0.717
OS03G0696300
Oryza sativa
OS03G0696300
I
0.717
OS08G0196700
Oryza sativa
OS08G0196700
N
0.717
PGSC0003DMG400006863
Solanum tuberosum
PGSC0003DMG400006863
I
0.717
PGSC0003DMG400011806
Solanum tuberosum
PGSC0003DMG400011806
N
0.717
Sb01g011220
Sorghum bicolor
Sb01g011220
I
0.717
Sb01g013430
Sorghum bicolor
Sb01g013430
N
0.717
Si022607m.g
Setaria italica
Si022607m.g
N
0.717
Si036465m.g
Setaria italica
Si036465m.g
N
0.717
Si037045m.g
Setaria italica
Si037045m.g
I
0.717
TCM_005875
Theobroma cacao
TCM_005875
I
0.717
Traes_4AL_7C4C68FD0
Triticum aestivum
Traes_4AL_7C4C68FD0
I
0.717
Traes_4BS_B7B7EFF37
Triticum aestivum
Traes_4BS_B7B7EFF37
I
0.717
Traes_4DS_AFBE29C20
Triticum aestivum
Traes_4DS_AFBE29C20
I
0.717
Traes_5AS_378F353CF
Triticum aestivum
Traes_5AS_378F353CF
N
0.717
Traes_5BS_F1DE20B4B
Triticum aestivum
Traes_5BS_F1DE20B4B
N
0.717
Traes_5DS_443F1993A
Triticum aestivum
Traes_5DS_443F1993A
N
0.717
TRIUR3_09920
Triticum urartu
TRIUR3_09920
I
0.717
TRIUR3_28596
Triticum urartu
TRIUR3_28596
N
0.717
VIT_13s0064g00860
Vitis vinifera
VIT_13s0064g00860
I
0.717
Ca_20250
Cicer arietinum
Ca_20250
N
0.717
Cla000845
Citrullus lanatus
Cla000845
N
0.717
30169.m006445
Ricinus communis
30169.m006445
I
0.717
estExt_fgenesh1_pg.C_420118
Physcomitrella patens
estExt_fgenesh1_pg.C_420118
N
0.717
mg014677m
Mimulus guttatus
mg014677m
N
0.717
mgf012950m
Mimulus guttatus
mgf012950m
I
0.717
Ciclev10015808m.g
Citrus clementina
Ciclev10015808m.g
I
0.717
Eucgr.F03169
Eucalyptus grandis
Eucgr.F03169
I
0.717
Eucgr.G03377
Eucalyptus grandis
Eucgr.G03377
N
0.717
evm.TU.supercontig_84.49
Carica papaya
evm.TU.supercontig_84.49
I
0.717
gene26819-v1.0-hybrid
Fragaria vesca
gene26819-v1.0-hybrid
N
0.717
Gorai.001G014200
Gossypium raimondii
Gorai.001G014200
N
0.717
Gorai.004G172100
Gossypium raimondii
Gorai.004G172100
I
0.717
Gorai.011G004400
Gossypium raimondii
Gorai.011G004400
N
0.717
orange1.1g019036m.g
Citrus sinensis
orange1.1g019036m.g
I
0.717
Pavir.Ia00780
Panicum virgatum
Pavir.Ia00780
I
0.717
Pavir.Ia01146
Panicum virgatum
Pavir.Ia01146
N
0.717
Pavir.Ib04124
Panicum virgatum
Pavir.Ib04124
N
0.717
Pavir.J08102
Panicum virgatum
Pavir.J08102
I
0.717
SapurV1A.0087s0010
Salix purpurea
SapurV1A.0087s0010
N
0.717
SapurV1A.1588s0020
Salix purpurea
SapurV1A.1588s0020
N
0.717
PK11147.1
Cannabis sativa
PK11147.1
I
0.717
chr3.CM0724.30.nd
Lotus japonicus
chr3.CM0724.30.nd
I
0.717
PRUPE_ppa016008mg
Prunus persica
PRUPE_ppa016008mg
N
0.714
SapurV1A.0133s0410
Salix purpurea
SapurV1A.0133s0410
I
0.714