CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g081840.1
(
Solanum lycopersicum
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
Solyc10g081840.1
T160423_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g081840.1.1
CBF/NF-Y
58
112
TPIFVNAKQYHGILRRRKFRTKEIEKNLLKPRKPFLHLSRHLHAKRRPRGGGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Solanum lycopersicum
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400028144
Solanum tuberosum
PGSC0003DMG400028144
N
0.927
PGSC0003DMG400021365
Solanum tuberosum
PGSC0003DMG400021365
N
0.836
Solyc01g006930.2
Solanum lycopersicum
Solyc01g006930.2
N
0.836
MDP0000183865
Malus domestica
MDP0000183865
I
0.773
Aquca_009_00676
Aquilegia coerulea
Aquca_009_00676
N
0.745
PGSC0003DMG400011806
Solanum tuberosum
PGSC0003DMG400011806
N
0.732
Solyc02g069860.2
Solanum lycopersicum
Solyc02g069860.2
N
0.732
TCM_026909
Theobroma cacao
TCM_026909
N
0.732
GLYMA12G36540
Glycine max
GLYMA12G36540
I
0.727
GSMUA_Achr4G03600_001
Musa acuminata
GSMUA_Achr4G03600_001
N
0.727
PGSC0003DMG401021124
Solanum tuberosum
PGSC0003DMG401021124
N
0.727
Cla009990
Citrullus lanatus
Cla009990
N
0.727
Cucsa.048230
Cucumis sativus
Cucsa.048230
N
0.727
mg014677m
Mimulus guttatus
mg014677m
N
0.727
Ciclev10016491m.g
Citrus clementina
Ciclev10016491m.g
N
0.727
orange1.1g026474m.g
Citrus sinensis
orange1.1g026474m.g
N
0.727
PK21261.1
Cannabis sativa
PK21261.1
I
0.727
PRUPE_ppa012173mg
Prunus persica
PRUPE_ppa012173mg
N
0.714
TCM_024732
Theobroma cacao
TCM_024732
I
0.714
Pm016266
Prunus mume
Pm016266
N
0.714
cassava24161.valid.m1
Manihot esculenta
cassava24161.valid.m1
N
0.714
cassava38260.valid.m1
Manihot esculenta
cassava38260.valid.m1
I
0.714
mgf025421m
Mimulus guttatus
mgf025421m
N
0.714
Eucgr.K01943
Eucalyptus grandis
Eucgr.K01943
N
0.714
gene28941-v1.0-hybrid
Fragaria vesca
gene28941-v1.0-hybrid
N
0.714
Gorai.002G151800
Gossypium raimondii
Gorai.002G151800
I
0.714
Gorai.003G093300
Gossypium raimondii
Gorai.003G093300
I
0.714
Gorai.009G115000
Gossypium raimondii
Gorai.009G115000
N
0.714
MDP0000279028
Malus domestica
MDP0000279028
N
0.714
NFYA5
Arabidopsis lyrata
Al_scaffold_0001_4860
N
0.709
AMTR_s00103p00144230
Amborella trichopoda
AMTR_s00103p00144230
I
0.709
NFYA5
Arabidopsis thaliana
AT1G54160
N
0.709
NFYA9
Arabidopsis thaliana
AT3G20910
N
0.709
Bo5g063060
Brassica oleracea
Bo5g063060
N
0.709
Bra032395
Brassica rapa
Bra032395
N
0.709
Bra037968
Brassica rapa
Bra037968
N
0.709
F775_09086
Aegilops tauschii
F775_09086
N
0.709
GLYMA09G02770
Glycine max
GLYMA09G02770
N
0.709
GLYMA15G13660
Glycine max
GLYMA15G13660
N
0.709
GSMUA_Achr7G01070_001
Musa acuminata
GSMUA_Achr7G01070_001
N
0.709
LPERR03G25340
Leersia perrieri
LPERR03G25340
I
0.709
LPERR12G16030
Leersia perrieri
LPERR12G16030
N
0.709
POPTR_0006s05210
Populus trichocarpa
POPTR_0006s05210
I
0.709
PRUPE_ppa011627mg
Prunus persica
PRUPE_ppa011627mg
N
0.709
NF-YA9
Arabidopsis lyrata
scaffold_302497.1
N
0.709
TCM_005875
Theobroma cacao
TCM_005875
I
0.709
Traes_5AS_378F353CF
Triticum aestivum
Traes_5AS_378F353CF
N
0.709
Traes_5BS_F1DE20B4B
Triticum aestivum
Traes_5BS_F1DE20B4B
N
0.709
Traes_5DS_443F1993A
Triticum aestivum
Traes_5DS_443F1993A
N
0.709
TRIUR3_28596
Triticum urartu
TRIUR3_28596
N
0.709
VIT_08s0007g08250
Vitis vinifera
VIT_08s0007g08250
I
0.709
Ca_20250
Cicer arietinum
Ca_20250
N
0.709
Cla015490
Citrullus lanatus
Cla015490
I
0.709
Pm010516
Prunus mume
Pm010516
N
0.709
Pm027028
Prunus mume
Pm027028
N
0.709
29333.m001059
Ricinus communis
29333.m001059
N
0.709
Cucsa.127910
Cucumis sativus
Cucsa.127910
I
0.709
Aquca_026_00359
Aquilegia coerulea
Aquca_026_00359
N
0.709
Bostr.15697s0348
Boechera stricta
Bostr.15697s0348
N
0.709
Bostr.19424s0556
Boechera stricta
Bostr.19424s0556
N
0.709
Bostr.7128s0065
Boechera stricta
Bostr.7128s0065
N
0.709
Cagra.10399s0005
Capsella grandiflora
Cagra.10399s0005
N
0.709
Cagra.1508s0155
Capsella grandiflora
Cagra.1508s0155
N
0.709
Cagra.20869s0002
Capsella grandiflora
Cagra.20869s0002
N
0.709
Carubv10009883m.g
Capsella rubella
Carubv10009883m.g
N
0.709
Carubv10010359m.g
Capsella rubella
Carubv10010359m.g
N
0.709
Carubv10014289m.g
Capsella rubella
Carubv10014289m.g
N
0.709
Ciclev10005144m.g
Citrus clementina
Ciclev10005144m.g
I
0.709
Gorai.004G066000
Gossypium raimondii
Gorai.004G066000
I
0.709
Lus10011326.g
Linum usitatissimum
Lus10011326.g
I
0.709
Lus10012202.g
Linum usitatissimum
Lus10012202.g
I
0.709
Lus10013592.g
Linum usitatissimum
Lus10013592.g
N
0.709
Lus10021259.g
Linum usitatissimum
Lus10021259.g
N
0.709
MDP0000223651
Malus domestica
MDP0000223651
N
0.709
MDP0000506954
Malus domestica
MDP0000506954
N
0.709
orange1.1g017825m.g
Citrus sinensis
orange1.1g017825m.g
I
0.709
Thhalv10009032m.g
Eutrema salsugineum
Thhalv10009032m.g
N
0.709
Thhalv10011685m.g
Eutrema salsugineum
Thhalv10011685m.g
N
0.709