CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UCRNP2_3187
(
Neofusicoccum parvum
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
UCRNP2_3187
T160488_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.786
0.786
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD50045
CBF/NF-Y
212
268
SPLYVNAKQFHRILKRRMARQKLEEALRLTSKGRKPYLHESRHNHAMRRPRGPGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Neofusicoccum parvum
TFs
286 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BPC5
Arabidopsis thaliana
AT4G38910
D
Bostr.25542s0071
Boechera stricta
Bostr.25542s0071
I
Bo7g119540
Brassica oleracea
Bo7g119540
I
Thhalv10025867m.g
Eutrema salsugineum
Thhalv10025867m.g
I