cassava41983.valid.m1 (Manihot esculenta)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 cassava41983.valid.m1 T160577_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41983.valid.m1 CBF/NF-Y 162 218

Links

Other CBF/NF-Y family TFs
Other Manihot esculenta TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava24247.valid.m1 Manihot esculenta cassava24247.valid.m1 N 0.911
29333.m001059 Ricinus communis 29333.m001059 N 0.839
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N 0.821
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N 0.821
PK26326.1 Cannabis sativa PK26326.1 N 0.821
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.786
GLYMA19G38800 Glycine max GLYMA19G38800 N 0.786
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N 0.786
TCM_022984 Theobroma cacao TCM_022984 N 0.786
Ca_00866 Cicer arietinum Ca_00866 N 0.786
mgf025421m Mimulus guttatus mgf025421m N 0.786
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N 0.786
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N 0.786
NFYA10 Arabidopsis thaliana AT5G06510 N 0.774
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N 0.774
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N 0.774
MDP0000183865 Malus domestica MDP0000183865 I 0.773
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.768
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.768
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N 0.768
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N 0.768
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N 0.768
GLYMA02G35190 Glycine max GLYMA02G35190 N 0.750
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.750
MTR_1g056530 Medicago truncatula MTR_1g056530 N 0.750
MTR_7g106450 Medicago truncatula MTR_7g106450 N 0.750
PGSC0003DMG400021365 Solanum tuberosum PGSC0003DMG400021365 N 0.750
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N 0.750
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N 0.750
Solyc01g006930.2 Solanum lycopersicum Solyc01g006930.2 N 0.750
Ca_14455 Cicer arietinum Ca_14455 N 0.750
Pm026038 Prunus mume Pm026038 N 0.750
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N 0.750
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N 0.750
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N 0.750
Cla017884 Citrullus lanatus Cla017884 N 0.732
Cucsa.241980 Cucumis sativus Cucsa.241980 N 0.732
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N 0.732
MDP0000375005 Malus domestica MDP0000375005 N 0.732
MDP0000948645 Malus domestica MDP0000948645 N 0.732
Bo3g060160 Brassica oleracea Bo3g060160 N 0.714
Bo9g176100 Brassica oleracea Bo9g176100 N 0.714
GSMUA_Achr3G29730_001 Musa acuminata GSMUA_Achr3G29730_001 N 0.714
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.714
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N 0.714
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N 0.714
Carubv10001713m.g Capsella rubella Carubv10001713m.g N 0.714
Carubv10014086m.g Capsella rubella Carubv10014086m.g N 0.714
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.714
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.714
MDP0000129029 Malus domestica MDP0000129029 N 0.714
MDP0000588222 Malus domestica MDP0000588222 N 0.714
MDP0000785523 Malus domestica MDP0000785523 N 0.714
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N 0.714