CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10001713m.g
(
Capsella rubella
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
Carubv10001713m.g
T160643_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10001713m
CBF/NF-Y
134
186
GTIYVNAKQYHGIIRRRQSRAKAEKLSRCRKPYIHHSRHLHAMRRPRGSGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Capsella rubella
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF398
Bos taurus
ENSBTAG00000020445
I
ZNF398
Callithrix jacchus
ENSCJAG00000010213
I
ZNF398
Canis familiaris
ENSCAFG00000004429
I
ENSCSAG00000007015
Chlorocebus sabaeus
ENSCSAG00000007015
I
ZNF398
Choloepus hoffmanni
ENSCHOG00000007407
I
ZNF398
Dasypus novemcinctus
ENSDNOG00000038814
I
ZNF398
Gorilla gorilla
ENSGGOG00000005812
I
ZNF398
Homo sapiens
ENSG00000197024
D
ENSSTOG00000013384
Ictidomys tridecemlineatus
ENSSTOG00000013384
I
ENSP00000338984
Macaca fascicularis
ENSP00000338984
I
ENSMICG00000016618
Microcebus murinus
ENSMICG00000016618
I
ENSMPUG00000006622
Mustela putorius furo
ENSMPUG00000006622
I
Zfp398
Mus musculus
ENSMUSG00000062519
I
Myotis_brandtii_ZNF398_10025637
Myotis brandtii
Myotis_brandtii_ZNF398_10025637
I
ZNF398
Myotis lucifugus
ENSMLUG00000007451
I
ENSNLEG00000003700
Nomascus leucogenys
ENSNLEG00000003700
I
ZNF398
Ochotona princeps
ENSOPRG00000010531
I
ZNF398
Oryctolagus cuniculus
ENSOCUG00000008416
I
ZNF398
Pan troglodytes
ENSPTRG00000023917
I
ENSPANG00000015944
Papio anubis
ENSPANG00000015944
I
ENSPPYG00000018150
Pongo abelii
ENSPPYG00000018150
I
ZNF398
Pteropus vampyrus
ENSPVAG00000010865
I
Zfp398
Rattus norvegicus
ENSRNOG00000006703
I
ENSTSYG00000002784
Tarsius syrichta
ENSTSYG00000002784
I