CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000314593
(
Malus domestica
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
MDP0000314593
T160715_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000314593
CBF/NF-Y
163
213
EPVYVNAKQYHGILRRRQSRAKAELEKKLIKARKXLISCRRCSRXAXSLLE
Links
Other
CBF/NF-Y
family TFs
Other
Malus domestica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1414531g001
Phoenix dactylifera
PDK_20s1414531g001
N
0.912
LjSGA_013150.1
Lotus japonicus
LjSGA_013150.1
N
0.879
Traes_6DL_FD903DBD8
Triticum aestivum
Traes_6DL_FD903DBD8
I
0.857
MLOC_5869
Hordeum vulgare
MLOC_5869
N
0.816
MLOC_52315
Hordeum vulgare
MLOC_52315
N
0.778
PDK_20s1474561g001
Phoenix dactylifera
PDK_20s1474561g001
N
0.769
PGSC0003DMG400008148
Solanum tuberosum
PGSC0003DMG400008148
N
0.765
PGSC0003DMG400011806
Solanum tuberosum
PGSC0003DMG400011806
N
0.750
BRADI4G01820
Brachypodium distachyon
BRADI4G01820
N
0.718
ONIVA12G17590
Oryza nivara
ONIVA12G17590
N
0.700