LjSGA_013150.1 (Lotus japonicus)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 LjSGA_013150.1 T160815_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_013150.1 CBF/NF-Y 166 198

Links

Other CBF/NF-Y family TFs
Other Lotus japonicus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30075.m001182 Ricinus communis 30075.m001182 N 0.818
Al_scaffold_0003_1456 Arabidopsis lyrata Al_scaffold_0003_1456 N 0.727
AMTR_s00024p00195160 Amborella trichopoda AMTR_s00024p00195160 I 0.727
AMTR_s00048p00192930 Amborella trichopoda AMTR_s00048p00192930 I 0.758
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.879
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.788
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.788
Bo1g134650 Brassica oleracea Bo1g134650 N 0.727
Bo5g063060 Brassica oleracea Bo5g063060 N 0.727
Bo5g105110 Brassica oleracea Bo5g105110 I 0.939
Bo9g169310 Brassica oleracea Bo9g169310 N 0.818
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.758
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N 0.909
Bostr.2902s0020 Boechera stricta Bostr.2902s0020 N 0.848
Bra003867 Brassica rapa Bra003867 N 0.727
Bra021527 Brassica rapa Bra021527 N 0.727
Bra023378 Brassica rapa Bra023378 N 0.818
Bra023913 Brassica rapa Bra023913 N 0.909
Bra031242 Brassica rapa Bra031242 I 0.939
Bra032395 Brassica rapa Bra032395 N 0.727
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I 0.879
BRADI4G01820 Brachypodium distachyon BRADI4G01820 N 0.718
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N 0.909
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.758
Cagra.1535s0021 Capsella grandiflora Cagra.1535s0021 N 0.848
Carubv10001701m.g Capsella rubella Carubv10001701m.g N 0.848
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.758
Carubv10014289m.g Capsella rubella Carubv10014289m.g N 0.909
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I 0.848
Ca_00866 Cicer arietinum Ca_00866 N 0.727
Ca_07995 Cicer arietinum Ca_07995 N 0.727
Ca_11593 Cicer arietinum Ca_11593 N 0.758
Ca_20250 Cicer arietinum Ca_20250 N 0.848
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I 0.909
Cla008690 Citrullus lanatus Cla008690 N 0.879
Cla009990 Citrullus lanatus Cla009990 N 0.788
Cla015490 Citrullus lanatus Cla015490 I 0.879
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.788
Cucsa.124180 Cucumis sativus Cucsa.124180 N 0.879
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.879
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N 0.879
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N 0.848
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N 0.848
Eucgr.F03169 Eucalyptus grandis Eucgr.F03169 I 0.788
Eucgr.J00764 Eucalyptus grandis Eucgr.J00764 N 0.909
EuGene.0000150165 Micromonas pusilla EuGene.0000150165 N 0.848
F775_09086 Aegilops tauschii F775_09086 N 0.727
fgenesh1_pg.C_scaffold_286000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_286000001 N 0.727
fgeneshCV_pg.C_scaffold_3000204 Chlorella vulgaris fgeneshCV_pg.C_scaffold_3000204 I 0.818
Genemark1.1758_g Coccomyxa subellipsoidea C169 Genemark1.1758_g I 0.818
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.727
GLYMA05G29970 Glycine max GLYMA05G29970 N 0.758
GLYMA07G04050 Glycine max GLYMA07G04050 I 0.727
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.727
GLYMA09G07960 Glycine max GLYMA09G07960 I 0.727
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.727
GLYMA15G18970 Glycine max GLYMA15G18970 I 0.758
GLYMA17G05920 Glycine max GLYMA17G05920 I 0.758
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.758
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.848
Gorai.009G143800 Gossypium raimondii Gorai.009G143800 N 0.727
Gorai.010G086300 Gossypium raimondii Gorai.010G086300 N 0.727
Gorai.011G057600 Gossypium raimondii Gorai.011G057600 N 0.758
Gorai.013G226200 Gossypium raimondii Gorai.013G226200 I 0.727
Gorai.013G251200 Gossypium raimondii Gorai.013G251200 N 0.909
GRMZM2G026157 Zea mays GRMZM2G026157 N 0.818
GRMZM2G091964 Zea mays GRMZM2G091964 I 0.818
GRMZM2G165488 Zea mays GRMZM2G165488 N 0.727
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.818
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.818
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N 0.788
GSMUA_AchrUn_randomG15140_001 Musa acuminata GSMUA_AchrUn_randomG15140_001 I 0.727
HAP2A Arabidopsis lyrata Al_scaffold_0006_1178 N 0.848
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.848
LPERR08G05240 Leersia perrieri LPERR08G05240 N 0.727
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.727
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.818
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.818
Lus10016411.g Linum usitatissimum Lus10016411.g I 0.818
Lus10019708.g Linum usitatissimum Lus10019708.g I 0.818
Lus10023358.g Linum usitatissimum Lus10023358.g N 0.818
Lus10038448.g Linum usitatissimum Lus10038448.g N 0.818
MDP0000296077 Malus domestica MDP0000296077 N 0.970
MDP0000314593 Malus domestica MDP0000314593 N 0.879
mg014677m Mimulus guttatus mg014677m N 0.818
mgf012950m Mimulus guttatus mgf012950m I 0.909
MLOC_52315 Hordeum vulgare MLOC_52315 N 0.778
MLOC_5869 Hordeum vulgare MLOC_5869 N 0.763
MLOC_76757 Hordeum vulgare MLOC_76757 N 0.758
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.727
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N 0.909
NFYA1 Arabidopsis thaliana AT5G12840 N 0.848
NFYA9 Arabidopsis thaliana AT3G20910 N 0.909
OPUNC08G05330 Oryza punctata OPUNC08G05330 N 0.727
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I 0.909
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N 0.848
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I 0.818
Pavir.J08102 Panicum virgatum Pavir.J08102 I 0.818
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N 0.879
PDK_20s1414531g001 Phoenix dactylifera PDK_20s1414531g001 N 0.794
PDK_20s1474561g001 Phoenix dactylifera PDK_20s1474561g001 N 0.818
PGSC0003DMG400008148 Solanum tuberosum PGSC0003DMG400008148 N 0.735
PK21261.1 Cannabis sativa PK21261.1 I 0.879
Pm010516 Prunus mume Pm010516 N 0.788
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N 0.818
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I 0.909
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N 0.788
SapurV1A.0027s0420 Salix purpurea SapurV1A.0027s0420 N 0.788
SapurV1A.0083s0230 Salix purpurea SapurV1A.0083s0230 N 0.818
SapurV1A.0534s0150 Salix purpurea SapurV1A.0534s0150 N 0.727
SapurV1A.2739s0010 Salix purpurea SapurV1A.2739s0010 N 0.788
Sb01g011220 Sorghum bicolor Sb01g011220 I 0.818
Si037045m.g Setaria italica Si037045m.g I 0.818
Solyc01g008490.2 Solanum lycopersicum Solyc01g008490.2 N 0.848
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I 0.879
TCM_040712 Theobroma cacao TCM_040712 I 0.879
Thhalv10009032m.g Eutrema salsugineum Thhalv10009032m.g N 0.727
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I 0.879
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I 0.879
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I 0.879
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.727
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.727
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.727
Traes_6DL_FD903DBD8 Triticum aestivum Traes_6DL_FD903DBD8 I 0.857
TRIUR3_09920 Triticum urartu TRIUR3_09920 I 0.879
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.727
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.879
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.727
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I 0.848