CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig2248.frz3.gene3
(
Meloidogyne hapla
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
MhA1_Contig2248.frz3.gene3
T160888_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB
VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.804
0.804
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.804
0.804
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.804
0.804
NFYA
M10403_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.804
0.804
NFYA
M10404_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.804
0.804
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.804
0.804
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig2248.frz3.gene3
CBF/NF-Y
225
280
EPIYVNEKQYTRILKRRAARAKLEMEGRIPKERRKYLHESRHRHAQNRARKEGGKF
Links
Other
CBF/NF-Y
family TFs
Other
Meloidogyne hapla
TFs
210 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf00089-snap-gene-0.29
Meloidogyne floridensis
maker-nMf.1.1.scaf00089-snap-gene-0.29
I
0.982
GPLIN_001226400
Globodera pallida
GPLIN_001226400
I
0.911
ENSEEUG00000006487
Erinaceus europaeus
ENSEEUG00000006487
I
0.860
DAPPUDRAFT_300656
Daphnia pulex
DAPPUDRAFT_300656
I
0.839
nAv.1.0.1.g00776
Acanthocheilonema viteae
nAv.1.0.1.g00776
I
0.839
nLs.2.1.2.g05605
Litomosoides sigmodontis
nLs.2.1.2.g05605
I
0.839
SBAD_0000676601
Soboliphyme baturini
SBAD_0000676601
I
0.839
ENSMEUG00000005917
Macropus eugenii
ENSMEUG00000005917
I
0.824
WUBG_05875
Wuchereria bancrofti
WUBG_05875
I
0.821
Bm6776
Brugia malayi
Bm6776
I
0.821
ISCW017122
Ixodes scapularis
ISCW017122
I
0.821
LOAG_02863
Loa loa
LOAG_02863
I
0.821
SPU_025589
Strongylocentrotus purpuratus
SPU_025589
I
0.821
SPU_025737
Strongylocentrotus purpuratus
SPU_025737
I
0.821
WBGene00242147
Onchocerca volvulus
WBGene00242147
I
0.821
estExt_fgenesh2_pg.C_2670023
Branchiostoma floridae
estExt_fgenesh2_pg.C_2670023
I
0.821
fgenesh2_pg.scaffold_208000070
Branchiostoma floridae
fgenesh2_pg.scaffold_208000070
I
0.821
GPUH_0002134401
Gongylonema pulchrum
GPUH_0002134401
I
0.821
nDi.2.2.2.g05199
Dirofilaria immitis
nDi.2.2.2.g05199
I
0.821
nOo.2.0.1.g03339
Onchocerca ochengi
nOo.2.0.1.g03339
I
0.821
ACEP21720
Atta cephalotes
ACEP21720
I
0.804
NFYA
Anolis carolinensis
ENSACAG00000016527
I
0.804
ENSAMEG00000004435
Ailuropoda melanoleuca
ENSAMEG00000004435
I
0.804
ENSAPLG00000002694
Anas platyrhynchos
ENSAPLG00000002694
I
0.804
NFYA
Bos taurus
ENSBTAG00000009905
I
0.804
NFYA
Canis familiaris
ENSCAFG00000001580
I
0.804
NFYA
Callithrix jacchus
ENSCJAG00000004074
I
0.804
NFYA
Cavia porcellus
ENSCPOG00000011146
I
0.804
ENSCSAG00000011196
Chlorocebus sabaeus
ENSCSAG00000011196
I
0.804
NFYA
Dasypus novemcinctus
ENSDNOG00000039692
I
0.804
Nfya
Dipodomys ordii
ENSDORG00000006450
I
0.804
NFYA
Equus caballus
ENSECAG00000007952
I
0.804
ENSETEG00000000629
Echinops telfairi
ENSETEG00000000629
I
0.804
ENSFALG00000002949
Ficedula albicollis
ENSFALG00000002949
I
0.804
NFYA
Felis catus
ENSFCAG00000027813
I
0.804
NFYA
Homo sapiens
ENSG00000001167
D
0.804
NFYA
Gallus gallus
ENSGALG00000003247
I
0.804
NFYA
Gorilla gorilla
ENSGGOG00000008485
I
0.804
ENSLACG00000015334
Latimeria chalumnae
ENSLACG00000015334
I
0.804
NFYA
Loxodonta africana
ENSLAFG00000016570
I
0.804
NFYA
Meleagris gallopavo
ENSMGAG00000010140
I
0.804
NFYA
Myotis lucifugus
ENSMLUG00000008253
I
0.804
NFYA
Macaca mulatta
ENSMMUG00000021173
I
0.804
NFYA
Monodelphis domestica
ENSMODG00000013084
I
0.804
ENSMPUG00000013686
Mustela putorius furo
ENSMPUG00000013686
I
0.804
Nfya
Mus musculus
ENSMUSG00000023994
D
0.804
ENSNLEG00000005028
Nomascus leucogenys
ENSNLEG00000005028
I
0.804
NFYA
Ornithorhynchus anatinus
ENSOANG00000011990
I
0.804
ENSOARG00000000894
Ovis aries
ENSOARG00000000894
I
0.804
NFYA
Oryctolagus cuniculus
ENSOCUG00000016869
I
0.804
NFYA
Otolemur garnettii
ENSOGAG00000002636
I
0.804
ENSPANG00000009714
Papio anubis
ENSPANG00000009714
I
0.804
NFYA
Procavia capensis
ENSPCAG00000011508
I
0.804
ENSPMAG00000000964
Petromyzon marinus
ENSPMAG00000000964
I
0.804
ENSPPYG00000016588
Pongo abelii
ENSPPYG00000016588
I
0.804
ENSPSIG00000013239
Pelodiscus sinensis
ENSPSIG00000013239
I
0.804
NFYA
Pan troglodytes
ENSPTRG00000018146
I
0.804
NFYA
Pteropus vampyrus
ENSPVAG00000008318
I
0.804
Nfya
Rattus norvegicus
ENSRNOG00000012702
I
0.804
ENSSHAG00000017808
Sarcophilus harrisii
ENSSHAG00000017808
I
0.804
ENSSSCG00000001600
Sus scrofa
ENSSSCG00000001600
I
0.804
NFYA
Sus scrofa
ENSSSCG00000001611
I
0.804
ENSSSCG00000022941
Sus scrofa
ENSSSCG00000022941
I
0.804
ENSSTOG00000023405
Ictidomys tridecemlineatus
ENSSTOG00000023405
I
0.804
NFYA
Taeniopygia guttata
ENSTGUG00000001832
I
0.804
ENSTSYG00000007176
Tarsius syrichta
ENSTSYG00000007176
I
0.804
NFYA
Tursiops truncatus
ENSTTRG00000013394
I
0.804
NFYA
Vicugna pacos
ENSVPAG00000008028
I
0.804
GB50732
Apis mellifera
GB50732
I
0.804
NV16776
Nasonia vitripennis
NV16776
I
0.804
PHUM011400
Pediculus humanus
PHUM011400
I
0.804
SINV17788
Solenopsis invicta
SINV17788
I
0.804
TC007453
Tribolium castaneum
TC007453
I
0.804
YQE_10237
Dendroctonus ponderosae
YQE_10237
I
0.804
Aan_R003793
Calypte anna
Aan_R003793
I
0.804
Afo_R002068
Aptenodytes forsteri
Afo_R002068
I
0.804
Alligator_sinensis_CCG020430.1
Alligator sinensis
Alligator_sinensis_CCG020430.1
I
0.804
Brh_R001483
Buceros rhinoceros
Brh_R001483
I
0.804
Cflo_01621--XP_001121566.1_APIME
Camponotus floridanus
Cflo_01621--XP_001121566.1_APIME
I
0.804
Cmyd_10011198
Chelonia mydas
Cmyd_10011198
I
0.804
ENSP00000345702-D2
Bos grunniens
ENSP00000345702-D2
I
0.804
ENSP00000345702
Macaca fascicularis
ENSP00000345702
I
0.804
Hsal_09569--XP_001121566.1_APIME
Harpegnathos saltator
Hsal_09569--XP_001121566.1_APIME
I
0.804
Myotis_brandtii_NFYA_10015424
Myotis brandtii
Myotis_brandtii_NFYA_10015424
I
0.804
Pvit_06013
Pogona vitticeps
Pvit_06013
I
0.804
Tal_R012767
Tyto alba
Tal_R012767
I
0.804
LDEC000161
Leptinotarsa decemlineata
LDEC000161
I
0.804
ALUE_0000650501
Ascaris lumbricoides
ALUE_0000650501
I
0.804
ASIM_0001003201
Anisakis simplex
ASIM_0001003201
I
0.804
ASU_03710
Ascaris suum
ASU_03710
I
0.804
TCNE_0001890401
Toxocara canis
TCNE_0001890401
I
0.804
CGI_10012001
Crassostrea gigas
CGI_10012001
I
0.786
ENSAMXG00000002532
Astyanax mexicanus
ENSAMXG00000002532
I
0.786
nfya
Danio rerio
ENSDARG00000042004
I
0.786
nfyal
Gasterosteus aculeatus
ENSGACG00000007867
I
0.786
ENSGMOG00000001226
Gadus morhua
ENSGMOG00000001226
I
0.786
ENSLOCG00000012292
Lepisosteus oculatus
ENSLOCG00000012292
I
0.786
NFYA
Microcebus murinus
ENSMICG00000009686
I
0.786
nfyal
Oryzias latipes
ENSORLG00000006088
I
0.786
ENSPFOG00000012890
Poecilia formosa
ENSPFOG00000012890
I
0.786
nfyal
Tetraodon nigroviridis
ENSTNIG00000015135
I
0.786
nfyal
Takifugu rubripes
ENSTRUG00000003925
I
0.786
ENSXMAG00000010069
Xiphophorus maculatus
ENSXMAG00000010069
I
0.786
Nf-YA
Drosophila melanogaster
FBgn0035993
I
0.786
GA17755
Drosophila pseudoobscura
FBgn0077764
I
0.786
GF24667
Drosophila ananassae
FBgn0101660
I
0.786
GG14038
Drosophila erecta
FBgn0106300
I
0.786
GH15528
Drosophila grimshawi
FBgn0123000
I
0.786
GI16805
Drosophila mojavensis
FBgn0139552
I
0.786
GJ12551
Drosophila virilis
FBgn0199791
I
0.786
GE21241
Drosophila yakuba
FBgn0238513
I
0.786
RPRC000951
Rhodnius prolixus
RPRC000951
I
0.786
Smp_030250
Schistosoma mansoni
Smp_030250
I
0.786
AAI00179
Xenopus laevis
AAI00179
I
0.786
HHAL009455-PA
Halyomorpha halys
HHAL009455-PA
I
0.786
Sjc_0096630
Schistosoma japonicum
Sjc_0096630
I
0.786
nfya
Xenopus tropicalis
XB-GENE-942007
I
0.786
nfya.S
Xenopus laevis
XB-GENE-942013
I
0.786
A_04341
Schistosoma haematobium
A_04341
I
0.786
DME_0000143101
Dracunculus medinensis
DME_0000143101
I
0.786
SCUD_0001212601
Schistosoma curassoni
SCUD_0001212601
I
0.786
SMRZ_0000504601
Schistosoma margrebowiei
SMRZ_0000504601
I
0.786
SMTD_0000774701
Schistosoma mattheei
SMTD_0000774701
I
0.786
SROB_0000925201
Schistosoma rodhaini
SROB_0000925201
I
0.786
SSLN_0000312901
Schistocephalus solidus
SSLN_0000312901
I
0.786
TCLT_0000871701
Thelazia callipaeda
TCLT_0000871701
I
0.786
TRE_0001025401
Trichobilharzia regenti
TRE_0001025401
I
0.786
PXEA_0001432401
Protopolystoma xenopodis
PXEA_0001432401
I
0.780
CpipJ_CPIJ010764
Culex pipiens
CpipJ_CPIJ010764
I
0.768
CpipJ_CPIJ017497
Culex pipiens
CpipJ_CPIJ017497
I
0.768
AGAP007376
Anopheles gambiae
AGAP007376
I
0.768
CapteG223273
Capitella teleta
CapteG223273
I
0.768
CGI_10002627
Crassostrea gigas
CGI_10002627
I
0.768
CPIJ010764
Culex quinquefasciatus
CPIJ010764
I
0.768
CPIJ017497
Culex quinquefasciatus
CPIJ017497
I
0.768
NFYA
Sorex araneus
ENSSARG00000009765
I
0.768
MESCA012339
Megaselia scalaris
MESCA012339
I
0.768
Ocbimv22031841m.g
Octopus bimaculoides
Ocbimv22031841m.g
I
0.768
Sakowv30001860m.g
Saccoglossus kowalevskii
Sakowv30001860m.g
I
0.768
Sakowv30044373m.g
Saccoglossus kowalevskii
Sakowv30044373m.g
I
0.768
SMU15024997
Schmidtea mediterranea
SMU15024997
I
0.768
SMU15029949
Schmidtea mediterranea
SMU15029949
I
0.768
AALB004535
Anopheles albimanus
AALB004535
I
0.768
MDOA015095
Musca domestica
MDOA015095
I
0.768
PPAI000251
Phlebotomus papatasi
PPAI000251
I
0.768
csin107256
Clonorchis sinensis
csin107256
I
0.768
D915_02266
Fasciola hepatica
D915_02266
I
0.768
ECPE_0000487901
Echinostoma caproni
ECPE_0000487901
I
0.768
L596_g5816
Steinernema carpocapsae
L596_g5816
I
0.768
L893_g18096
Steinernema glaseri
L893_g18096
I
0.768
L898_g620
Steinernema monticolum
L898_g620
I
0.768
nRc.2.0.1.g32781
Romanomermis culicivorax
nRc.2.0.1.g32781
I
0.768
T265_04195
Opisthorchis viverrini
T265_04195
I
0.768
ACYPI008647
Acyrthosiphon pisum
ACYPI008647
I
0.750
Aqu1.224085
Amphimedon queenslandica
Aqu1.224085
I
0.750
ENSCING00000013482
Ciona intestinalis
ENSCING00000013482
I
0.750
ENSCSAVG00000007408
Ciona savignyi
ENSCSAVG00000007408
I
0.750
nfyal
Danio rerio
ENSDARG00000001621
I
0.750
HelroG146050
Helobdella robusta
HelroG146050
I
0.750
tetur23g00370
Tetranychus urticae
tetur23g00370
I
0.750
Ocbimv22027261m.g
Octopus bimaculoides
Ocbimv22027261m.g
I
0.750
ACUA028400
Anopheles culicifacies
ACUA028400
I
0.750
ANCCAN_07957
Ancylostoma caninum
ANCCAN_07957
I
0.750
ANCCEY_15520
Ancylostoma ceylanicum
ANCCEY_15520
I
0.750
ANCDUO_00071
Ancylostoma duodenale
ANCDUO_00071
I
0.750
DICVIV_12815
Dictyocaulus viviparus
DICVIV_12815
I
0.750
HCOI00898900
Haemonchus contortus
HCOI00898900
I
0.750
HPBE_0000764601
Heligmosomoides bakeri
HPBE_0000764601
I
0.750
HPLM_0000552201
Haemonchus placei
HPLM_0000552201
I
0.750
L892_g3951
Steinernema scapterisci
L892_g3951
I
0.750
MCOS_0000435001
Mesocestoides corti
MCOS_0000435001
I
0.750
NECAME_09605
Necator americanus
NECAME_09605
I
0.750
OESDEN_02547
Oesophagostomum dentatum
OESDEN_02547
I
0.750
OESDEN_11135
Oesophagostomum dentatum
OESDEN_11135
I
0.750
TELCIR_00805
Teladorsagia circumcincta
TELCIR_00805
I
0.750
TsM_000826500
Taenia solium
TsM_000826500
I
0.750
TTAC_0000640001
Hydatigera taeniaeformis
TTAC_0000640001
I
0.750
ADAC005077
Anopheles darlingi
ADAC005077
I
0.745
AARA007990
Anopheles arabiensis
AARA007990
I
0.745
ACHR000726
Anopheles christyi
ACHR000726
I
0.745
ACOM025626
Anopheles coluzzii
ACOM025626
I
0.745
AFUN002061
Anopheles funestus
AFUN002061
I
0.745
AMEC004928
Anopheles melas
AMEC004928
I
0.745
AMEM003440
Anopheles merus
AMEM003440
I
0.745
AQUA004503
Anopheles quadriannulatus
AQUA004503
I
0.745
ASTEI01331
Anopheles stephensi
ASTEI01331
I
0.745
ACOC_0000844001
Angiostrongylus costaricensis
ACOC_0000844001
I
0.735
KGM_14733
Danaus plexippus
KGM_14733
I
0.732
SNAPOd2T00008768001
Oikopleura dioica
SNAPOd2T00008768001
I
0.732
D918_06860
Trichuris suis
D918_06860
I
0.732
ECANG7_02027
Echinococcus canadensis
ECANG7_02027
I
0.732
EmuJ_001061700
Echinococcus multilocularis
EmuJ_001061700
I
0.732
HDID_0001056801
Hymenolepis diminuta
HDID_0001056801
I
0.732
HmN_000419600
Hymenolepis microstoma
HmN_000419600
I
0.732
HNAJ_0000223001
Hymenolepis nana
HNAJ_0000223001
I
0.732
L889_g30157
Steinernema feltiae
L889_g30157
I
0.732
NBR_0000887901
Nippostrongylus brasiliensis
NBR_0000887901
I
0.732
SMUV_0000428301
Syphacia muris
SMUV_0000428301
I
0.732
TMUE_s0062005000
Trichuris muris
TMUE_s0062005000
I
0.732
TTRE_0000464501
Trichuris trichiura
TTRE_0000464501
I
0.732
AMIN010496
Anopheles minimus
AMIN010496
I
0.725
CAOG_07995
Capsaspora owczarzaki
CAOG_07995
I
0.714
ACYPI48827
Acyrthosiphon pisum
ACYPI48827
I
0.714
LotgiG159581
Lottia gigantea
LotgiG159581
I
0.714
ML027313a
Mnemiopsis leidyi
ML027313a
I
0.714
NEMVEDRAFT_v1g248844
Nematostella vectensis
NEMVEDRAFT_v1g248844
I
0.714
NEMVEDRAFT_v1g82757
Nematostella vectensis
NEMVEDRAFT_v1g82757
I
0.714
Gfo_R002980
Geospiza fortis
Gfo_R002980
I
0.714
Hba_19892
Heterorhabditis bacteriophora
Hba_19892
I
0.714
scaffold5-EXSNAP2012.16
Pristionchus exspectatus
scaffold5-EXSNAP2012.16
I
0.714